Parental gene:

APEX1, ENSBTAG00000002745

Aliases:APEX1, APEN, BAP1, REF-1
Description:DNA-(apurinic or apyrimidinic site) lyase DNA-(apurinic or apyrimidinic site) lyase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P23196]
Organism:Cow (Bos taurus)
Coordinates:10:26706594..26709174(-)


>ENSBTAG00000002745
ATGCCGAAACGTGGGAAAAAGGGAGCGGTGGTCGAAGACGCGGAAGAGCCCAAGACTGAGCCAGAGGCGAAGAAGAGTAA
GGCAGGAGCGAAAAAGAACGAAAAAGAGGCAGTAGGAGAGGGCGCAGTTCTGTATGAAGACCCCCCAGATCAGAAAACCT
CACCCAGTGGCAAATCAGCCACACTCAAGATCTGCTCGTGGAATGTGGATGGGCTTCGAGCCTGGATTAAGAAGAAAGGT
TTAGATTGGGTAAAGGAAGAAGCCCCAGACATCCTGTGCCTCCAAGAGACCAAATGTTCAGAGAACAAACTACCAGTTGA
ACTTCAAGAATTGTCTGGATTGTCCCATCAGTACTGGTCAGCTCCTTCAGACAAGGAAGGGTACAGTGGTGTGGGCCTCC
TCTCCCGCCAGTGCCCACTCAAAGTCTCTTATGGCATTGGTGAGGAAGAACATGATCAGGAAGGCCGAGTGATTGTGGCT
GAATATGACGCATTTGTGCTGGTGACAGCCTATGTGCCTAATGCAGGCCGAGGTCTGGTGCGCCTGGAGTATCGCCAGCG
CTGGGATGAAGCTTTTCGCAAATTCCTGAAGGGTTTGGCATCCCGCAAGCCCCTTGTGCTATGTGGGGACCTCAATGTGG
CTCATGAAGAAATTGACCTTCGCAACCCGAAGGGAAATAAAAAGAATGCTGGCTTCACTCCACAAGAGCGGCAGGGCTTC
GGGGAATTGCTGCAGGCTGTGCCACTCACTGACAGTTTCCGGCATCTCTACCCCAACACCGCCTATGCCTACACCTTCTG
GACCTATATGATGAATGCGCGATCCAAAAACGTTGGTTGGCGCCTTGATTATTTTTTGTTATCTCAGTCTCTGTTGCCTG
CATTGTGTGACAGTAAAATCCGTTCCAAGGCTCTGGGCAGTGACCACTGTCCCATTACCCTATACCTAGCTCTGTGA

Library Parental gene expression (RPM)
ERP005899_liver 34 .61 RPM
ERP005899_muscle 61 .08 RPM
SRP017611_brain 34 .49 RPM
SRP017611_kidney 41 .25 RPM
SRP017611_liver 29 .90 RPM
SRP030211_testis 38 .44 RPM



Species Parental gene accession Homology type Retrogenes number
Echinops telfairi ENSETEG00000004855 ortholog_one2many 1 retrogene
retro_etel_1392,
Loxodonta africana ENSLAFG00000021872 ortholog_one2one 1 retrogene
retro_lafr_948,
Mus musculus ENSMUSG00000035960 ortholog_one2one 2 retrogenes
retro_mmus_2027, retro_mmus_433,
Otolemur garnettii ENSOGAG00000013335 ortholog_one2many 3 retrogenes
retro_ogar_1284, retro_ogar_2145, retro_ogar_3243,
Rattus norvegicus ENSRNOG00000009663 ortholog_one2one 1 retrogene
retro_rnor_2971,
Ictidomys tridecemlineatus ENSSTOG00000010096 ortholog_one2one 1 retrogene
retro_itri_1560,
Tupaia belangeri ENSTBEG00000006405 ortholog_one2one 1 retrogene
retro_tbel_3409,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1729 87.89 90.25
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Download FASTA sequences of all ENSBTAG00000002745 retrocopies