Parental gene:

FNTA, ENSBTAG00000003201

Aliases:None
Description:protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [Source:RefSeq peptide;Acc:NP_803464]
Organism:Cow (Bos taurus)
Coordinates:27:37391495..37415386(+)


>ENSBTAG00000003201
ATGGCGGCCGCCGACGGGGTCGGGGAGGCCGCGCAGGGCGGGGATCCCGGTCAGCCGGAGCCGCCGCCTCCTCCTCAGCC
CCATCCTCCTCCGCCGCCTCCCCAGCCGCCGCAGGAAGAGGCGGCGGCGGCGTCCCCTATGGACGACGGGTTCCTGAGCC
TGGACTCTCCCACCTATGTCCTGTACAGGGACAGGCCAGAATGGGCTGATATAGATCCAGTGCCGCAGAATGATGGCCCC
AATCCAGTGGTCCAGATCATTTATAGTGAGAAATTTCAGGACGTCTATGATTATTTCCGGGCTGTCCTGCAGCGCGACGA
GAGAAGTGAGCGGGCTTTTAAATTAACCAGAGATGCTATTGAGTTAAATGCAGCCAACTACACAGTGTGGCATTTCCGAA
GAGTTCTCTTAAAGTCACTTCAGAAGGATCTACATGAGGAAATGAACTACATCTCGGCAATAATTGAGGAGCAGCCCAAA
AACTATCAAGTTTGGCATCATAGGCGAGTGCTGGTGGAATGGCTGAGAGACCCATCACAGGAGCTTGAGTTTATTGCGGA
TATTCTTACTCAGGATGCAAAGAATTACCATGCCTGGCAGCACCGACAGTGGGTTATTCAGGAATTTAAACTTTGGGATA
ATGAGCTGCAGTATGTAGACCAACTTCTCAAAGAGGATGTGAGAAATAACTCTGTCTGGAACCAAAGATATTTCGTAATT
TCTAACACTACGGGCTACAATGATCGTGCTATATTGGAGAGAGAAGTCCAGTACACTCTGGAAATGATCAAACTAGTCCC
ACATAATGAAAGTGCGTGGAATTATTTGAAAGGGATTTTGCAGGATCGTGGTCTTTCCAAATATCCCAATCTGTTAAATC
AATTACTTGACTTACAACCAAGTCACAGCTCTCCCTACCTAATTGCCTTTCTTGTGGATATCTATGAAGACATGCTAGAA
AACCAATGTGACAACAAGGAGGACATTCTTAATAAAGCGTTAGAGTTATGTGAAATCTTAGCTAAAGAAAAGGACACTAT
AAGAAAGGAATATTGGAGATATATTGGAAGATCCCTTCAAAGCAAACACAGCACAGAAAGTGACCCACCTACAAACGTAC
AGCAATAA

Library Parental gene expression (RPM)
ERP005899_liver 45 .56 RPM
ERP005899_muscle 34 .79 RPM
SRP017611_brain 75 .87 RPM
SRP017611_kidney 39 .53 RPM
SRP017611_liver 21 .29 RPM
SRP030211_testis 280 .98 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000005385 ortholog_one2one 1 retrogene
retro_cfam_941,
Homo sapiens ENSG00000168522 possible_ortholog 1 retrogene
retro_hsap_805,
Macaca mulatta ENSMMUG00000017158 ortholog_one2one 1 retrogene
retro_mmul_1078,
Monodelphis domestica ENSMODG00000010003 ortholog_one2one 1 retrogene
retro_mdom_1656,
Nomascus leucogenys ENSNLEG00000012979 ortholog_one2one 1 retrogene
retro_nleu_2408,
Pteropus vampyrus ENSPVAG00000013502 ortholog_one2one 2 retrogenes
retro_pvam_1157, retro_pvam_1433,
Tursiops truncatus ENSTTRG00000008870 ortholog_one2one 1 retrogene
retro_ttru_579,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1431 84.68 61.33
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2. retro_btau_1768 85.41 100.00
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Download FASTA sequences of all ENSBTAG00000003201 retrocopies