Parental gene:

ENSMODG00000010003

Aliases:None
Description:None
Organism:Opossum (Monodelphis domestica)
Coordinates:1:578638196..578656531(+)


>ENSMODG00000010003
TACAGGGACAGACCAGAATGGGCTGATATAGAGCCGGTGCCCCAGAATGATGGGCCAAATCCAGTGGTCCAGATAATTTA
TAGTGAAAAATGTAAAGATGTTTATGATTATTTTCGAGCTGTTCTGCAACGTGATGAAAGAAGTGAACGAGCTTTTAAAT
TAACTGGAGATGCTATTGAGCTAAATGCAGCTAATTACACTGTATGGCATTTTCGGAGAGTTCTCTTAAAGTCATTACAA
AAGGATCTAAGTGAGGAAATGAACTATATTACTGCAATAATTGAGGAACAGCCCAAAAACTACCAACTCAATAAATCACC
CATTCACATCTCATTTCTTTTATGTAAAACTTTCTCCAGTGAAAACCTTCATTTCTTTTCTGAACATATATATTGCATTA
GAAATGAGACAACAATTGGTTCATTTATTCATGAGTACCCTCTTTGGGATCTTGAGCTGCAATATGTAGACCAACTTCTC
AAAGTGGATGTGAGAAATAACTCTGTCTGGAACCAAAGACACTTTGTAATTTCTAACACTTCAGGCTACAATGATCCTGC
TATCCTGGAGAGAGAAGTCCAGTATACTCTAGAAATGATAAAAACTGCACCACATAATGAAAGTGCATGGAACTACTTAA
AAGGGATTTTGCAAGATCGTGGCCTTTCTAAGTATCCCAACCTTTTAGAGCAGTTGTTAGATTTACAACCAAGTCACAGT
TCTCCCTACCTGATTGCCTTCCTTGTGGATATATATGAAGATATGCTAGAAAACCAATGTGACAACAAGGAAGATACGCT
TAATAAAGCATTAGAGTTATGTGAAATTCTAGCTAAAGAAAAAGACACTATAAGAAAGGAATATTGGAGATATATTGGAA
GATCCCTTCAAAACAAA

Library Parental gene expression (RPM)
SRP007412_brain 56 .14 RPM
SRP007412_cerebellum 62 .35 RPM
SRP007412_heart 50 .83 RPM
SRP007412_kidney 75 .06 RPM
SRP007412_liver 71 .50 RPM
SRP007412_testis 75 .63 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000003201 ortholog_one2one 2 retrogenes
retro_btau_1431, retro_btau_1768,
Canis familiaris ENSCAFG00000005385 ortholog_one2one 1 retrogene
retro_cfam_941,
Erinaceus europaeus ENSEEUG00000008272 ortholog_one2one 1 retrogene
retro_eeur_532,
Homo sapiens ENSG00000168522 ortholog_one2many 1 retrogene
retro_hsap_805,
Loxodonta africana ENSLAFG00000000631 ortholog_one2one 1 retrogene
retro_lafr_506,
Macaca mulatta ENSMMUG00000017158 ortholog_one2one 1 retrogene
retro_mmul_1078,
Nomascus leucogenys ENSNLEG00000012979 ortholog_one2many 1 retrogene
retro_nleu_2408,
Pteropus vampyrus ENSPVAG00000013502 ortholog_one2one 2 retrogenes
retro_pvam_1157, retro_pvam_1433,
Sorex araneus ENSSARG00000009660 ortholog_one2one 1 retrogene
retro_sara_109,
Ictidomys tridecemlineatus ENSSTOG00000011626 ortholog_one2one 1 retrogene
retro_itri_1221,
Tursiops truncatus ENSTTRG00000008870 ortholog_one2one 1 retrogene
retro_ttru_579,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_1656 85.44 52.51
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Download FASTA sequences of all ENSMODG00000010003 retrocopies