Parental gene:

EIF3M, ENSBTAG00000005338

Aliases:EIF3M, HFL-B5
Description:eukaryotic translation initiation factor 3 subunit M [Source:RefSeq peptide;Acc:NP_001030389]
Organism:Cow (Bos taurus)
Coordinates:15:64095494..64112928(+)


>ENSBTAG00000005338
ATGAGTGTCCCGGCGTTCATCGACATCAGCGAGGAAGATCAGGCTGCTGAACTTCGCGCTTATTTGAAGTCTAAAGGAGC
TGAAATTTCAGAAGAGAATTCAGAAGGTGGACTTCATGTAGATTTAGCTCAGATTATTGAAGCCTGCGATGTATGTCTGA
AGGAAGATGATAAAGATGTTGAAAGTGTGATGAACAGCGTGGTATCCCTCCTGTTGATCCTGGAACCAGATAAGCAAGAA
GCTCTGATTGAAAGCCTATGTGAGAAACTGGTCAAATTTCGGGAAGGTGAACGTCCGTCTCTGAGACTGCAGTTGCTAAG
CAACCTTTTCCATGGGATGGATAAGAATACTCCTGTAAGATATACAGTGTATTGCAGCCTCATTAAAGTGGCAGCATCTT
GTGGGGCCATCCAGTATATTCCAACTGAGCTGGATCAAGTTAGAAAATGGATTTCTGACTGGAACCTCACCACTGAAAAA
AAACACACCCTTTTAAGACTACTTTATGAGGCACTTGTGGATTGTAAGAAAAGTGATGCCGCATCAAAAGTTATGGTGGA
ATTGTTAGGCAGTTACACGGAGGACAATGCTTCCCAGGCTCGAGTTGATGCCCACAGGTGTATTGTGCGAGCATTGAAAG
ATCCAAATGCATTCCTTTTTGACCATCTTCTTACGTTAAAACCAGTCAAGTTTTTGGAAGGCGAGCTTATTCATGATCTT
TTAACCATTTTTGTGAGTGCTAAATTGGCATCATATGTCAAGTTTTATCAGAATAATAAAGACTTCATTGATTCACTTGG
CCTACTGCATGAACAGAATATGGCAAAAATGAGACTGCTTACTTTTATGGGAATGGCCGTGGAAAATAAAGAAATTTCTT
TTGACACAATGCAACAAGAACTTCATATTGGAGCTGATGATGTTGAAGCATTTGTTATTGATGCTGTAAGAACTAAAATG
GTCTACTGCAAAATTGATCAAACCCAGAGAAAAGTTGTTGTCAGTCATAGCACACATCGGACATTTGGAAAACAGCAGTG
GCAGCAACTCTATGACACACTTAATGCCTGGAAACAAAATTTGAACAAAGTGAAAAACAGCCTTTTGAGTCTTTCTGACA
CCTGA

Library Parental gene expression (RPM)
ERP005899_liver 40 .45 RPM
ERP005899_muscle 184 .71 RPM
SRP017611_brain 9 .36 RPM
SRP017611_kidney 36 .27 RPM
SRP017611_liver 15 .25 RPM
SRP030211_testis 111 .39 RPM



Species Parental gene accession Homology type Retrogenes number
Echinops telfairi ENSETEG00000013437 ortholog_one2one 1 retrogene
retro_etel_120,
Myotis lucifugus ENSMLUG00000014727 ortholog_one2one 2 retrogenes
retro_mluc_1982, retro_mluc_431,
Mus musculus ENSMUSG00000027170 ortholog_one2one 1 retrogene
retro_mmus_421,
Oryctolagus cuniculus ENSOCUG00000004483 ortholog_one2one 1 retrogene
retro_ocun_282,
Otolemur garnettii ENSOGAG00000015913 ortholog_one2one 1 retrogene
retro_ogar_1783,
Pteropus vampyrus ENSPVAG00000015083 ortholog_one2one 1 retrogene
retro_pvam_1134,
Vicugna pacos ENSVPAG00000007791 ortholog_one2one 1 retrogene
retro_vpac_342,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_812 80.08 61.23
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2. retro_btau_1736 98.93 100.00
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Download FASTA sequences of all ENSBTAG00000005338 retrocopies