Parental gene:

C8H9ORF85, ENSBTAG00000006831

Aliases:None
Description:None
Organism:Cow (Bos taurus)
Coordinates:8:48456363..48516656(+)


>ENSBTAG00000006831
ATGAGCTCACAGAAAGGGAACGTGACTCGTTCCAGGCCTCAGAGGCACCAGAATACTTTTAGCTTCAAAAATGACAAGTT
TGATAAGAGTGTTCAGACCAAGAAAATTAATGCAAAACTTCATGATGGAGTATGTCAGCGTTGTAAAGAAGTTCTTGAAT
GGCGTGTAAAATACAGCAAGTACAAACCACTATCAAAGCCCAAAAAATGTGTTAAATGTTTACAAAAGACAGTGAAGGAT
TCTTATCATATAATGTGTAGACCATGTGCCTGTGAACTTGAAGTTTGTGCCAAGTGTGGAAAGAAAGAAGATGTTGTTAT
TCCGTTTAATAAAGAACCAGAAAAGACAGAAAATGTTGAAAATAATTTACGTTCCAGCCATAGAAGAAGCTGCAGAAGGA
ATGAAGTAAATGATGATGATTTAGATTTTGATATTGATTTAGATGACACAGAAGAAGAAGACAATTAA

Library Parental gene expression (RPM)
ERP005899_liver 1 .51 RPM
ERP005899_muscle 1 .64 RPM
SRP017611_brain 1 .64 RPM
SRP017611_kidney 2 .31 RPM
SRP017611_liver 0 .30 RPM
SRP030211_testis 16 .54 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000007254 possible_ortholog 1 retrogene
retro_amel_730,
Canis familiaris ENSCAFG00000001820 possible_ortholog 1 retrogene
retro_cfam_2126,
Callithrix jacchus ENSCJAG00000001441 possible_ortholog 2 retrogenes
retro_cjac_1283, retro_cjac_1374,
Cavia porcellus ENSCPOG00000025848 possible_ortholog 2 retrogenes
retro_cpor_1538, retro_cpor_316,
Felis catus ENSFCAG00000031942 possible_ortholog 1 retrogene
retro_fcat_1955,
Homo sapiens ENSG00000155621 possible_ortholog 2 retrogenes
retro_hsap_2104, retro_hsap_2895,
Myotis lucifugus ENSMLUG00000024309 possible_ortholog 2 retrogenes
retro_mluc_2449, retro_mluc_2526,
Macaca mulatta ENSMMUG00000018881 possible_ortholog 2 retrogenes
retro_mmul_670, retro_mmul_988,
Mustela putorius furo ENSMPUG00000008971 possible_ortholog 1 retrogene
retro_mputfur_1413,
Mus musculus ENSMUSG00000035171 possible_ortholog 6 retrogenes
retro_mmus_1049, retro_mmus_2254, retro_mmus_2286, retro_mmus_2781, retro_mmus_2941, retro_mmus_3698,
Nomascus leucogenys ENSNLEG00000001023 possible_ortholog 1 retrogene
retro_nleu_1272,
Oryctolagus cuniculus ENSOCUG00000024578 possible_ortholog 2 retrogenes
retro_ocun_703, retro_ocun_766,
Otolemur garnettii ENSOGAG00000011302 possible_ortholog 1 retrogene
retro_ogar_979,
Pongo abelii ENSPPYG00000029745 ortholog_one2many 2 retrogenes
retro_pabe_1996, retro_pabe_2397,
Pan troglodytes ENSPTRG00000021018 possible_ortholog 2 retrogenes
retro_ptro_1543, retro_ptro_1958,
Rattus norvegicus ENSRNOG00000027161 possible_ortholog 5 retrogenes
retro_rnor_1898, retro_rnor_2010, retro_rnor_2242, retro_rnor_2859, retro_rnor_2960,
Sorex araneus ENSSARG00000004523 possible_ortholog 1 retrogene
retro_sara_260,
Tupaia belangeri ENSTBEG00000015556 possible_ortholog 6 retrogenes
retro_tbel_1998, retro_tbel_200, retro_tbel_2406, retro_tbel_2410, retro_tbel_3539, retro_tbel_940,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_39 96.75 99.35
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Download FASTA sequences of all ENSBTAG00000006831 retrocopies