Parental gene: | ATP1B3, ENSBTAG00000014140 |
| Aliases: | None |
| Description: | Sodium/potassium-transporting ATPase subunit beta-3 [Source:UniProtKB/Swiss-Prot;Acc:Q3T0C6] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 1:128050717..128085713(-) |
>ENSBTAG00000014140
ATGACGAAGACAGACAAGAAGTCCTTCAACCAGAGCCTGGCCGAGTGGAAGCTCTTCATCTACAACCGGACAACCGGAGA
GTTCCTGGGGCGCACCGCCAAGAGCTGGGGTTTGATCTTGCTCTTCTACCTAGTCTTTTATGGGTTCCTGGCTGCACTCT
TTTCATTCACAATGTGGGCCATGCTTCAGACTCTGAATGATGAGGTTCCAAAATATCGTGACCAGATTCCTAGTCCAGGA
CTTATGGTTTTTCCAAAACCAGTGTCAGCGTTGGATTTTTCATTCAGCCTGTCTGATGCAGAATCCTATCAAGGGTACAT
TGATGACCTTAAGAAATTTCTAAAGCCATATGGCTTAGAAGAACAGAAGAATCTCACAGATTGTACCAATGGAACCTTTT
TTGAGCAGAAGGGTCCAGAATACACAGCATGTCAGTTTCCTCTTGCCTTACTTGAAGCATGCAGTGGTGTGGATGATCCC
ACGTTTGGCTACCAAGAAGGAAAGCCTTGTATTCTTGTGAAAATGAACAGAATAATTGGATTAAAGCCTCAAGGAGAACC
AAGGATAGAATGTACTGGAAAGAGCGAAAGCACAGCATTTCTATCAACTTATCCTTCCAATGGAACGATAGATTTAAAAT
ATTTTCCATATTATGGGAAAAAACTGCATGGGAACTACCTGCAGCCACTAGTTGCCGTCCAGGTCGGCTTTGGTAGTGAT
GCTGACGTAAGAGAAGTAATGGTTGAGTGCAAGATCGATGGATCACCCAACCTAAAAACCCAGAATGACCGTGACAAGTT
TTTAGGACGAGTTGCATTCAAGATCACCATGCATGCATAG
| Library | Parental gene expression (RPM) |
|---|---|
| ERP005899_liver | 83 .56 RPM |
| ERP005899_muscle | 162 .80 RPM |
| SRP017611_brain | 35 .26 RPM |
| SRP017611_kidney | 21 .34 RPM |
| SRP017611_liver | 73 .09 RPM |
| SRP030211_testis | 135 .47 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000007515 | ortholog_one2one | 4 retrogenes | |
| Callithrix jacchus | ENSCJAG00000001981 | ortholog_one2many | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000003739 | ortholog_one2many | 4 retrogenes | |
| Equus caballus | ENSECAG00000019885 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000069849 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000010553 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000032412 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000004663 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000008662 | ortholog_one2one | 1 retrogene | |
| Procavia capensis | ENSPCAG00000013927 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000014169 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000015476 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000011501 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000011676 | ortholog_one2many | 3 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000013235 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000001004 | ortholog_one2many | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000000222 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000012038 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_318 | 74.68 | 56.27 | Please wait, loading  |
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| 2. | retro_btau_920 | 79.46 | 79.21 | Please wait, loading |
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| 3. | retro_btau_1136 | 66.00 | 53.41 | Please wait, loading |
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| 4. | retro_btau_1322 | 75.00 | 56.99 | Please wait, loading |
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| 5. | retro_btau_1743 | 51.83 | 58.06 | Please wait, loading |
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Download FASTA sequences of all ENSBTAG00000014140 retrocopies