Parental gene: | BT.85322, ENSBTAG00000015598 |
| Aliases: | None |
| Description: | 40S ribosomal protein S10 [Source:UniProtKB/Swiss-Prot;Acc:Q3T0F4] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 23:8434515..8441522(-) |
>ENSBTAG00000015598
ATGTTGATGCCTAAGAAGAACCGGATTGCCATTTATGAACTCCTTTTTAAGGAGGGGGTGATGGTGGCCAAGAAGGATGT
CCACATGCCCAAGCACCCGGAGCTAGCAGACAAGAATGTGCCCAATCTTCACGTCATGAAAGCCATGCAGTCTCTCAAGT
CACGAGGCTACGTGAAGGAACAGTTTGCCTGGAGACATTTCTACTGGTACCTCACCAACGAGGGCATCCAGTATCTCCGT
GATTACCTCCACCTGCCCCCTGAGATCGTGCCCGCCACCCTGCGCCGCAGCCGTCCTGAGACTGGCCGGCCAAGGCCCAA
AGGTCTGGAGGGAGAGCGACCTGCAAGACTCACTCGAGGGGAAGCCGACAGAGACACCTACAGACGAAGCGCCGTGCCCC
AAGTAGTAATTTGTGATATAAAAGCAAGGTATAAAACTGGTGCCGACAAGAAGGCCGAGGCCGGGGCTGGGTCAGCAACT
GAATTCCAGTTTAGAGGCGGATTTGGTCGTGGACGTGGTCAGCCACCTCAGCCTAAACAGGAATAG
| Library | Parental gene expression (RPM) |
|---|---|
| ERP005899_liver | 104 .90 RPM |
| ERP005899_muscle | 1011 .07 RPM |
| SRP017611_brain | 121 .69 RPM |
| SRP017611_kidney | 171 .47 RPM |
| SRP017611_liver | 151 .32 RPM |
| SRP030211_testis | 141 .93 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Latimeria chalumnae | ENSLACG00000017219 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000008539 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000007495 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000013929 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000016516 | possible_ortholog | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000000731 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_844 | 87.39 | 66.67 | Please wait, loading  |
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| 2. | retro_btau_989 | 72.46 | 100.00 | Please wait, loading |
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| 3. | retro_btau_1334 | 91.52 | 100.00 | Please wait, loading |
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Download FASTA sequences of all ENSBTAG00000015598 retrocopies