Parental gene:

BT.66169, ENSBTAG00000023938

Aliases:CENPA, CENP-A
Description:histone H3-like centromeric protein A [Source:RefSeq peptide;Acc:NP_001192309]
Organism:Cow (Bos taurus)
Coordinates:11:72781246..72787461(-)


>ENSBTAG00000023938
ATGGGCCCCCGCCGCCACAAACGCAAGCCCGAAACACCAAGGAGGCGCCCCGCGAGCCCGGCTCCCGCCGCCCCCCGGCC
GACCCCGTCCTTAGGCACGTCCTCCCGTCCACTTGCTCGCCGGAGACATACAGTCCTGAAGGAGATCCGAACTCTTCAGA
AGACCACACACCTGCTGTTAAGAAAGAGCCCCTTCTGCCGCCTGGCAAGAGAAATATGTGTTCAATTCACTCGTGGTGTG
GACTTCAATTGGCAAGCCCAGGCCCTGTTGGCCCTACAAGAGGCGGCAGAAGCATTTCTAGTTCATCTCTTTGAGGATGC
CTATCTCCTCTCCTTACACGCCGGCCGCGTCACGCTCTTCCCGAAGGATGTGCAGCTGGCCCGGAGGATCCGAGGCATTC
AGGAAGGGCTTGGCTGA

Library Parental gene expression (RPM)
SRP017611_brain 0 .18 RPM
SRP017611_kidney 1 .01 RPM
SRP017611_liver 0 .00 RPM
ERP005899_muscle 7 .76 RPM
ERP005899_liver 1 .44 RPM
SRP030211_testis 3 .81 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000004496 ortholog_many2many 3 retrogenes
retro_chof_2096, retro_chof_2448, retro_chof_4,
Ornithorhynchus anatinus ENSOANG00000000516 ortholog_one2many 1 retrogene
retro_oana_72,
Otolemur garnettii ENSOGAG00000024154 ortholog_one2many 2 retrogenes
retro_ogar_3405, retro_ogar_3505,
Ictidomys tridecemlineatus ENSSTOG00000025168 ortholog_one2many 2 retrogenes
retro_itri_835, retro_itri_994,
Tarsius syrichta ENSTSYG00000010334 ortholog_one2many 1 retrogene
retro_tsyr_2007,
Tursiops truncatus ENSTTRG00000010278 ortholog_one2many 2 retrogenes
retro_ttru_590, retro_ttru_784,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_947 75.91 99.28
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Download FASTA sequences of all ENSBTAG00000023938 retrocopies