Parental gene:

CHP, ENSBTAG00000027173

Aliases:CHP1, CHP
Description:Calcium-binding protein p22 [Source:UniProtKB/Swiss-Prot;Acc:Q3SYS6]
Organism:Cow (Bos taurus)
Coordinates:10:36835139..36872289(+)


>ENSBTAG00000027173
ATGGGGTCCCGGGCCTCCACGTTACTGCGGGACGAAGAGCTCGAGGAGATCAAGAAGGAAACTGGCTTTTCTCACAGTCA
GATCACCCGCCTCTACAGCCGGTTCACCAGCCTGGACAAAGGAGAGAATGGGACTCTCAGCCGGGAAGACTTTCAGCGGA
TTCCAGAACTTGCCATCAACCCATTGGGGGACCGGATCATCAACGCCTTCTTTCCAGAGGGAGAGGACCAGGTAAACTTC
CGGGGATTCATGAGAACCTTGGCTCATTTCCGACCCATTGAGGATAATGAAAAGAGCAAAGATGTGAATGGACCAGAACC
ACTCAACAGCCGAAGCAACAAACTGCACTTTGCTTTTCGACTGTATGACTTGGATAAAGATGACAAGATCTCCCGTGATG
AGCTGTTACAGGTGCTACGCATGATGGTCGGAGTGAATATCTCAGATGAGCAGCTGGGCAGCATTGCAGACAGGACCATC
CAGGAGGCTGATCAGGATGGGGACAGCGCCATCTCTTTCACAGAATTTGTTAAGGTTTTGGAGAAGGTGGACGTAGAACA
GAAAATGAGCATCCGATTTCTTCACTAA

Library Parental gene expression (RPM)
ERP005899_liver 22 .06 RPM
ERP005899_muscle 131 .02 RPM
SRP017611_brain 101 .77 RPM
SRP017611_kidney 148 .53 RPM
SRP017611_liver 30 .35 RPM
SRP030211_testis 201 .76 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000010619 within_species_paralog 1 retrogene
retro_btau_1660,
Callithrix jacchus ENSCJAG00000020761 ortholog_one2one 1 retrogene
retro_cjac_2396,
Equus caballus ENSECAG00000019751 ortholog_one2one 1 retrogene
retro_ecab_1099,
Felis catus ENSFCAG00000006346 ortholog_one2one 1 retrogene
retro_fcat_1964,
Gorilla gorilla ENSGGOG00000007312 ortholog_one2one 2 retrogenes
retro_ggor_1293, retro_ggor_2392,
Loxodonta africana ENSLAFG00000014743 ortholog_one2one 3 retrogenes
retro_lafr_221, retro_lafr_795, retro_lafr_838,
Oryctolagus cuniculus ENSOCUG00000013832 ortholog_one2one 1 retrogene
retro_ocun_68,
Otolemur garnettii ENSOGAG00000013099 ortholog_one2one 2 retrogenes
retro_ogar_2442, retro_ogar_628,
Procavia capensis ENSPCAG00000005419 ortholog_one2one 1 retrogene
retro_pcap_240,
Pongo abelii ENSPPYG00000006370 ortholog_one2one 2 retrogenes
retro_pabe_2749, retro_pabe_2925,
Pteropus vampyrus ENSPVAG00000003150 ortholog_one2one 1 retrogene
retro_pvam_1207,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1785 69.39 99.49
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Download FASTA sequences of all ENSBTAG00000027173 retrocopies