Parental gene:

CHP, ENSPPYG00000006370

Aliases:CHP1, CHP
Description:calcium-binding protein p22 [Source:RefSeq peptide;Acc:NP_001127537]
Organism:Orangutan (Pongo abelii)
Coordinates:15:37658678..37713454(+)


>ENSPPYG00000006370
ATGGGTTCTCGGGCCTCCACGTTACTGCGGGACGAAGAGCTCGAGGAGATCAAGAAGGAGACCGGCTTTTCCCACAGTCA
AATCACTCGCCTCTACAGCCGGTTCAGCAACCTGGACAAAGGATATAATGGTACTCTCAGCCGGGAAGATTTCCAGAGGA
TTCCAGAACTTGCCATCAACCCACTGGGGGACCGGATCATCAATGCCTTCTTTCCAGAGGGAGAGGACCAGGTAAACTTC
CGTGGATTCATGCGAACTTTGGCTCATTTCCGCCCCATTGAGGATAATGAAAAGAGCAAAGATGTGAATGGACCTGAACC
ACTCAACAGCCGAAGCAACAAACTGCACTTTGCTTTTCGACTATATGATTTGGATAAAGATGAAAAGATCTCCCGTGATG
AGCTGTTACAGGTGCTACGCATGATGGTCGGAGTAAATATCTCAGATGAGCAGCTGGGCAGCATCGCAGACAGGACCATT
CAGGAGGCTGATCAGGATGGGGACAGTGCCATATCTTTCACAGAATTTGTTAAGGTTTTGGAGAAGGTGGATGTAGAACA
GAAAATGAGCATCCGATTTCTTCACTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 48 .16 RPM
SRP007412_cerebellum 16 .29 RPM
SRP007412_heart 12 .64 RPM
SRP007412_kidney 28 .97 RPM
SRP007412_liver 15 .55 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000027173 ortholog_one2one 1 retrogene
retro_btau_1785,
Canis familiaris ENSCAFG00000009525 ortholog_one2one 1 retrogene
retro_cfam_2136,
Callithrix jacchus ENSCJAG00000020761 ortholog_one2one 1 retrogene
retro_cjac_2396,
Cavia porcellus ENSCPOG00000010577 ortholog_one2one 2 retrogenes
retro_cpor_1224, retro_cpor_726,
Equus caballus ENSECAG00000019751 ortholog_one2one 1 retrogene
retro_ecab_1099,
Felis catus ENSFCAG00000006346 ortholog_one2one 1 retrogene
retro_fcat_1964,
Homo sapiens ENSG00000187446 ortholog_one2one 2 retrogenes
retro_hsap_3334, retro_hsap_3541,
Gorilla gorilla ENSGGOG00000007312 ortholog_one2one 2 retrogenes
retro_ggor_1293, retro_ggor_2392,
Loxodonta africana ENSLAFG00000014743 ortholog_one2one 3 retrogenes
retro_lafr_221, retro_lafr_795, retro_lafr_838,
Macaca mulatta ENSMMUG00000017092 ortholog_one2one 2 retrogenes
retro_mmul_1809, retro_mmul_2088,
Mus musculus ENSMUSG00000014077 ortholog_one2one 4 retrogenes
retro_mmus_1458, retro_mmus_2094, retro_mmus_3133, retro_mmus_3469,
Nomascus leucogenys ENSNLEG00000003465 ortholog_one2one 4 retrogenes
retro_nleu_1678, retro_nleu_2269, retro_nleu_2608, retro_nleu_2609,
Oryctolagus cuniculus ENSOCUG00000013832 ortholog_one2one 1 retrogene
retro_ocun_68,
Otolemur garnettii ENSOGAG00000013099 ortholog_one2one 2 retrogenes
retro_ogar_2442, retro_ogar_628,
Procavia capensis ENSPCAG00000005419 ortholog_one2one 1 retrogene
retro_pcap_240,
Pan troglodytes ENSPTRG00000006942 ortholog_one2one 2 retrogenes
retro_ptro_2144, retro_ptro_2407,
Pteropus vampyrus ENSPVAG00000003150 ortholog_one2one 1 retrogene
retro_pvam_1207,
Rattus norvegicus ENSRNOG00000004742 ortholog_one2one 2 retrogenes
retro_rnor_2034, retro_rnor_2223,
Ictidomys tridecemlineatus ENSSTOG00000014503 ortholog_one2one 1 retrogene
retro_itri_227,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2749 86.99 74.87
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2. retro_pabe_2925 83.62 59.49
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Download FASTA sequences of all ENSPPYG00000006370 retrocopies