Parental gene:

HDGF, ENSBTAG00000039793

Aliases:None
Description:hepatoma-derived growth factor [Source:RefSeq peptide;Acc:NP_787026]
Organism:Cow (Bos taurus)
Coordinates:3:14130195..14138913(+)


>ENSBTAG00000039793
ATGTCGCGATCCAACCGGCAGAAGGAGTACAAATGCGGGGACCTGGTGTTCGCCAAGATGAAGGGCTACCCACACTGGCC
GGCCCGGATTGACGAGATGCCGGAGGCTGCCGTGAAATCAACAGCCAACAAATACCAAGTCTTTTTTTTTGGGACCCACG
AGACGGCATTCCTGGGCCCCAAAGACCTCTTCCCTTACGAAGAGTCCAAGGAGAAGTTTGGCAAGCCCAACAAGAGGAAA
GGGTTCAGCGAGGGGCTGTGGGAGATCGAGAACAACCCCACCGTCAAGGCTTCTGGCTACCAGTCCTCCCAGAAAAAGAG
CTGTGTGGAAGAGCCCGAACCGGAGCCCGAAGCCACTGAGGGTGATGGCGACAAGAAGGGGAATGCCGAGGGAAGCAGTG
ATGAGGAAGGGAAGCTAGTCATTGACGAGCCAACCAAGGAGAAGAATGAGAAGGGAGCGCTGAAGAGGAGAGCGGGAGAC
CTACTGGAGGACTCCCCCAAACGCCCCAAGGAAGCAGAAGACCTTGAAGGGGAGGAGAAAGAGGGGGCCACGTTGGAGGG
TGAGAGGCCCCTTCCAGTGGAGGCGGAGAAGAACAGTACCCCGTCTGAGCCCGGCTCTGGCCGGGGGCCTCCTCAGGAGG
AAGAAGAGGAGGAAGAAGAGGAAGAGGCTGCCAAGGAAGACGCCGAGGCCCCGGGCCTGAGAGATCACGAGAGACTG

Library Parental gene expression (RPM)
ERP005899_liver 5 .34 RPM
ERP005899_muscle 52 .00 RPM
SRP017611_brain 37 .18 RPM
SRP017611_kidney 52 .22 RPM
SRP017611_liver 52 .70 RPM
SRP030211_testis 45 .18 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000018527 within_species_paralog 1 retrogene
retro_btau_1740,
Callithrix jacchus ENSCJAG00000006157 ortholog_one2one 2 retrogenes
retro_cjac_338, retro_cjac_4022,
Dasypus novemcinctus ENSDNOG00000010231 ortholog_one2many 1 retrogene
retro_dnov_4,
Equus caballus ENSECAG00000011178 ortholog_one2one 1 retrogene
retro_ecab_5,
Echinops telfairi ENSETEG00000005243 ortholog_one2one 1 retrogene
retro_etel_1899,
Homo sapiens ENSG00000143321 ortholog_one2one 1 retrogene
retro_hsap_33,
Myotis lucifugus ENSMLUG00000010413 ortholog_one2one 1 retrogene
retro_mluc_257,
Mus musculus ENSMUSG00000004897 ortholog_one2one 1 retrogene
retro_mmus_3647,
Pongo abelii ENSPPYG00000000703 ortholog_one2one 1 retrogene
retro_pabe_6,
Pan troglodytes ENSPTRG00000001474 ortholog_one2one 1 retrogene
retro_ptro_1,
Sus scrofa ENSSSCG00000006468 ortholog_one2one 1 retrogene
retro_sscr_65,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_216 58.46 80.33
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Download FASTA sequences of all ENSBTAG00000039793 retrocopies