Parental gene:

HDGF, ENSPPYG00000000703

Aliases:None
Description:hepatoma-derived growth factor [Source:HGNC Symbol;Acc:4856]
Organism:Orangutan (Pongo abelii)
Coordinates:1:94756766..94766630(+)


>ENSPPYG00000000703
ATGTCGCGATCCAACCGGCAGAAGGAGTACAAATGCGGGGACCTGGTGTTCGCCAAGATGAAGGGCTACCCACACTGGCC
GGCCCGGATTGACGAGATGCCTGAGGCTGCCGTGAAATCAACAGCCAACAAATACCAAGTCTTTTTTTTCGGGACCCACG
AGACGGCATTCCTGGGCCCCAAAGACCTCTTCCCTTACGAGGAATCCAAGGAGAAGTTTGGCAAGCCCAACAAGAGGAAA
GGGTTCAGCGAGGGGCTGTGGGAGATCGAGAACAACCCTACTGTCAAGGCTTCTGGCTATCAGTCCTCCCAGAAAAAGAG
CTGTGTGGAAGAGCCTGAACCTGAGCCCGAAGCCACAGAGGGTGACGGTGATAAGAAGGGGAATGCAGAGGGCAGCAGCG
ATGAGGAAGGGAAGCTGGTCATTGATGAGCCAGCCAAGGAGAAGAATGAGAAAGGAGCGCTGAAGAGGAGGGCAGGGGAC
TTGCTGGAGGACTCTCCTAAACGTCCCAAGGAGGCAGAAAACCCTGAAGGAGAGGAGAAGGAGGCAGCCACCTTGGAGGG
TGAGAGGCCCCTTCCTATGGAGGTGGAAAAGAATAGCACCCCCTCTGAGCCCGGCTCTGGCCGGGGGCCTCCCCAAGAGG
AAGAAGAAGAGGAGGATGAAGAGGAAGAGGCTACCAAGGAAGATGCTGAGGCCCCAGGCATCAGAGATCATGAGAGCCTG
TAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 98 .64 RPM
SRP007412_cerebellum 132 .06 RPM
SRP007412_heart 51 .75 RPM
SRP007412_kidney 195 .37 RPM
SRP007412_liver 83 .02 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000039793 ortholog_one2one 1 retrogene
retro_btau_216,
Callithrix jacchus ENSCJAG00000006157 ortholog_one2one 2 retrogenes
retro_cjac_338, retro_cjac_4022,
Dasypus novemcinctus ENSDNOG00000010231 ortholog_one2many 1 retrogene
retro_dnov_4,
Equus caballus ENSECAG00000011178 ortholog_one2one 1 retrogene
retro_ecab_5,
Echinops telfairi ENSETEG00000005243 ortholog_one2one 1 retrogene
retro_etel_1899,
Homo sapiens ENSG00000143321 ortholog_one2one 1 retrogene
retro_hsap_33,
Myotis lucifugus ENSMLUG00000010413 ortholog_one2one 1 retrogene
retro_mluc_257,
Mus musculus ENSMUSG00000004897 ortholog_one2one 1 retrogene
retro_mmus_3647,
Pan troglodytes ENSPTRG00000001474 ortholog_one2one 1 retrogene
retro_ptro_1,
Sus scrofa ENSSSCG00000006468 ortholog_one2one 1 retrogene
retro_sscr_65,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_6 65.25 58.75
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Download FASTA sequences of all ENSPPYG00000000703 retrocopies