Parental gene: | TRAPPC1, ENSBTAG00000047214 |
| Aliases: | None |
| Description: | Trafficking protein particle complex subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17QI1] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 19:28221789..28223283(-) |
>ENSBTAG00000047214
ATGACTGTCCACAACCTGTACCTGTTTGACCGAAATGGAGTGTGTCTGCATTACAGCGAGTGGCACCGCAAGAAGCAAGC
AGGGATCCCTAAGGAGGAGGAGTACAAGCTGATGTACGGGATGCTCTTCTCTATCCGCTCTTTTGTCAGCAAGATGTCCC
CGCTAGACATGAAGGACGGCTTCCTGGCCTTCCAAACTAGCCGTTACAAACTCCATTACTACGAGACGCCCACTGGGATC
AAGGTTGTCATGAATACAGACTTGGGCGTGGGGCCCATCCGAGATGTGCTGCACCACATCTACAGTGCGCTGTATGTGGA
GCTGGTGGTGAAGAATCCCCTGTGCCCGCTTGGCCAGACTGTGCAAAGTGAGCTCTTCCGCTCCCGACTGGACTCCTACG
TCCGCTCTCTGCCCTTCTTCTCTGCCCGGGCTGGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| ERP005899_liver | 7 .71 RPM |
| ERP005899_muscle | 19 .48 RPM |
| SRP017611_brain | 23 .43 RPM |
| SRP017611_kidney | 23 .06 RPM |
| SRP017611_liver | 11 .93 RPM |
| SRP030211_testis | 14 .71 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000014756 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000004320 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000010582 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000010306 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_280 | 64.96 | 92.41 | Please wait, loading  |
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Download FASTA sequences of all ENSBTAG00000047214 retrocopies