Parental gene:

TRAPPC1, ENSCJAG00000014756

Aliases:None
Description:trafficking protein particle complex 1 [Source:HGNC Symbol;Acc:19894]
Organism:Marmoset (Callithrix jacchus)
Coordinates:5:73900464..73902128(+)


>ENSCJAG00000014756
ATGACTGTCCACAACCTGTACCTGTTTGACCGGAATGGAGTATGTCTGCACTATAGCGAATGGCACCGCAAGAAGCAAGC
AGGCATTCCCAAGGAGGAGGAGTACAAGCTAATGTACGGGATGCTCTTCTCTATCCGCTCCTTTGTCAGCAAGATGTCCC
CGCTAGACATGAAGGATGGCTTCTTGGCCTTTCAAACTAGCCGTTACAAACTCCATTACTACGAGACGCCCACTGGGATC
AAAGTTGTCATGAATACTGACTTGGGCGTGGGACCCATCCGAGATGTACTGCATCACATCTACAGTGCGCTGTATGTGGA
GCTGGTGGTGAAGAATCCCCTATGCCCGCTGGGCCAAACTGTGCAAAGCGAGCTCTTTCGCTCCCGACTGGATTCCTATG
TTCGCTCTCTGCCCTTCTTCTCCGCCCGGGCTGGCTGA

Library Parental gene expression (RPM)
SRP051959_spleen 2 .08 RPM
SRP051959_skeletal_muscle 2 .66 RPM
SRP051959_lymph_node 3 .40 RPM
SRP051959_lung 2 .18 RPM
SRP051959_liver 1 .34 RPM
SRP051959_kidney 1 .86 RPM
SRP051959_heart 1 .30 RPM
SRP051959_colon 1 .46 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000047214 ortholog_one2one 1 retrogene
retro_btau_280,
Erinaceus europaeus ENSEEUG00000004320 ortholog_one2one 1 retrogene
retro_eeur_665,
Sorex araneus ENSSARG00000010582 ortholog_one2one 1 retrogene
retro_sara_590,
Tursiops truncatus ENSTTRG00000010306 ortholog_one2one 1 retrogene
retro_ttru_403,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1057 72.97 50.34
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Download FASTA sequences of all ENSCJAG00000014756 retrocopies