Parental gene: | TRAPPC1, ENSCJAG00000014756 |
| Aliases: | None |
| Description: | trafficking protein particle complex 1 [Source:HGNC Symbol;Acc:19894] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 5:73900464..73902128(+) |
>ENSCJAG00000014756
ATGACTGTCCACAACCTGTACCTGTTTGACCGGAATGGAGTATGTCTGCACTATAGCGAATGGCACCGCAAGAAGCAAGC
AGGCATTCCCAAGGAGGAGGAGTACAAGCTAATGTACGGGATGCTCTTCTCTATCCGCTCCTTTGTCAGCAAGATGTCCC
CGCTAGACATGAAGGATGGCTTCTTGGCCTTTCAAACTAGCCGTTACAAACTCCATTACTACGAGACGCCCACTGGGATC
AAAGTTGTCATGAATACTGACTTGGGCGTGGGACCCATCCGAGATGTACTGCATCACATCTACAGTGCGCTGTATGTGGA
GCTGGTGGTGAAGAATCCCCTATGCCCGCTGGGCCAAACTGTGCAAAGCGAGCTCTTTCGCTCCCGACTGGATTCCTATG
TTCGCTCTCTGCCCTTCTTCTCCGCCCGGGCTGGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_colon | 1 .46 RPM |
| SRP051959_heart | 1 .30 RPM |
| SRP051959_kidney | 1 .86 RPM |
| SRP051959_liver | 1 .34 RPM |
| SRP051959_lung | 2 .18 RPM |
| SRP051959_lymph_node | 3 .40 RPM |
| SRP051959_skeletal_muscle | 2 .66 RPM |
| SRP051959_spleen | 2 .08 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000047214 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000004320 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000010582 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000010306 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1057 | 72.97 | 50.34 | Please wait, loading  |
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Download FASTA sequences of all ENSCJAG00000014756 retrocopies