Parental gene:

PRKRIR, ENSCAFG00000005274

Aliases:None
Description:protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) [Source:HGNC Symbol;Acc:9440]
Organism:Dog (Canis familiaris)
Coordinates:21:22293488..22315761(+)


>ENSCAFG00000005274
ATGCCGAACTTCTGCGCTGCCCCCAACTGCACGAGGAAGAGCACGCAGTCGGACCTGGCCTTCTTCAGGTTCCCGCGGGA
CCCGGCCAGATGCCAGAAATGGGTGGAGAATTGTAGGAGAGCAGATTTAGAAGATAAAACACCTGATCAACTAAATAAAC
ATTATCGATTATGTGCCAAACACTTTGAGACCTCTATGATCTGTAGAACTAGTCCTTATAGGACAGTTCTTCGTGATAAT
GCAATACCAACAATATTTGATCTTACCAGTCATTTGAACAATCCACATAGTAGACACAGAAAACGAATAAAAGAATTGAG
TGAAGATGAAATCCGGACACTGAAACAGAAAAAAATTGATGAAACTTCTGAACAGGAACCCAAACATAAAGAAATAAACA
ACAGCAATGCTCAGAACCCCAGTGCAGAAGAAGGGGGTGAAGAACAGGATGAAGACATTTTACCTTTGACTCTCGAAGAG
AAAGAAAACAAAGAATACCTAAAATCTTTATTTGAAATTTTGATTCTTATGGGAAAACAAAACATACCTCTGGATGGGCA
TGAAACTGATGAAATCCCAGAGGGTCTCTTTACTCCTGATAACTTTCAAGCACTGCTGGAGTGCCGGATAAATTCTGGTG
AAGAGGTTCTAAGAAAGCGTTTTGAGACAACAGCAGTTAACACATTGTTCTGCTCAAAAACACAACAGAAACAGATGCTA
GAAATCTGTGAGAGCTGCATCCGGGAAGAAACCCTCAGGGAAGTGAGAGACTCTCACTTCTTTTCCATCATCACTGATGA
TGTAGTGGACATAGCAGGGGAAGAACACTTGCCTGTGTTGGTGAGGTTTGTTGATGAATCTCATAACCTGAGAGAGGAAT
TTTTGGGCTTCTTGCCTTACGAAGCCGATGCGGAAATTTTGGCTGTGAAATTTCACACTACGATAACCGAGAAGTGGGGG
TTAAATATGGAATATTGTCGTGGTCAGGCTTACATCGTATCTAGTGGATTTTCTTCCAAAATGAAAATTGTTGCTTCTAG
ACTTTTAGAGAAATATCCCCAAGCTGTCTACACACTTTGTTCTTCCTGTGCCTTAAACATGTGGTTGGCAAAATCAGTGC
CTGTTGTGGGAGTATCTGTTGCATTAGGAACAATTGAGGAAGTTTGTTCGTTCTTCCATCGATCTCCACAACTGCTTTTG
GAGCTTGACAATGTAATTTCTGTCCTTTTTCAGAATAATGAGGAAAAGGGTAAAGAACTGAAGGAAATCTGCCATTCTCA
GTGGACAGGCAGGCATGATGCTTTTGAAATTTTAGTGGATCTCCTACAAGCACTTGTTCTATGTTTAGATGGTATAAATA
GTGATACAAATATTAGATGGAATAACTATATAGCTGGTCGAGCTTTTGTACTCTGTAGTGCAGTAACAGATTTTGATTTC
ATTGTTACCATTGTTGTCCTTAAGAATGTTCTATCTTTTACAAGAGCCTTTGGGAAAAATCTCCAGGGGCAAACCTCTGA
TGTCTTCTTTGCAGCCAGTAGCTTGACTGCAGTGCTGCATTCTCTAAATGAAGTGATGGAAAATATTGAAGTTTATCATG
AATTTTGGTTCGAAGAAGCCACAAATTTGGCAACTAAACTAGATATTCAGATGAAACTCCCTGGCAAATTCCGCAGAGCG
CAGCAAGGTAACCTGGAATCTCAGCTCACCTCTGAAAGTTACTATAAAGAAACTCTAAGTGTTCCAACAGTGGAACACAT
TATTCAGGAACTGAAAGATATATTCTCAGAACAGCACCTCAAAGCTCTTAAATGCTTATCTCTTGTACCCTCTGTCATGG
GACAGCTCAAATTTAATACATCAGAGGAGCACCATGCTGACATGTACAGAAGTGACCTGCCCAATCCTGACACACTCTCA
GCTGAGCTGCATTGCTGGAGAATCAAATGGAAACACAGAGGGAAAGATATAGAGCTTCCATCCACCATTTATGAAGCCCT
ACATCTACCAGACATCAAGTTTTTTCCTAATGTTTATGCATTGCTCAAAGTCCTATGTATTCTTCCTGTGATGAAGGTTG
AGAATGAACGCTATGAAAATGGGCGAAAGCGTCTCAAAGCATACCTGAGGAACACTTTGACAGACCAAAGGTCAAGTAAC
TTGGCTCTGCTTAACATAAATTTTGATATAAAACATGATCTGGATTTAATGGTAGACACATATATCAAACTCTATACAAC
TAAGTCAGAGCTTCCTACAGATAACTCAGAAACCATTGAAAATACCTAA

Library Parental gene expression (RPM)
SRP012049_cerebellum 21 .80 RPM
SRP017611_brain 14 .61 RPM
SRP017611_kidney 30 .38 RPM
SRP017611_liver 10 .88 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000024488 possible_ortholog 1 retrogene
retro_acar_167,
Bos taurus ENSBTAG00000031609 ortholog_one2one 2 retrogenes
retro_btau_1797, retro_btau_780,
Equus caballus ENSECAG00000021982 ortholog_one2one 1 retrogene
retro_ecab_150,
Homo sapiens ENSG00000137492 ortholog_one2one 1 retrogene
retro_hsap_4080,
Mustela putorius furo ENSMPUG00000008784 ortholog_one2one 1 retrogene
retro_mputfur_1571,
Pan troglodytes ENSPTRG00000004091 ortholog_one2many 1 retrogene
retro_ptro_2766,
Tursiops truncatus ENSTTRG00000013287 ortholog_one2many 1 retrogene
retro_ttru_126,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_663 97.90 100.00
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Download FASTA sequences of all ENSCAFG00000005274 retrocopies