Parental gene:

PRKRIR, ENSPTRG00000004091

Aliases:None
Description:Protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) [Source:UniProtKB/TrEMBL;Acc:K7DMS0]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:11:74118907..74134431(-)


>ENSPTRG00000004091
TGCCAGAAGTGGGTGGAGAACTGTAGGAGAGCAGACTTAGAAGATAAAACACCTGATCAGCTAAATAAACATTATCGATT
ATGTGCCAAACATTTTGAGACCTCTATGATCTGTAGAACTAGTCCTTATAGGACAGTTCTTCGAGATAATGCAATACCAA
CAATATTTGATCTTACCAGTCATTTGAACAACCCACATAGTAGACACAGAAAACGAATAAAAGAACTGAGTGAAGATGAA
ATCAGGACACTGAAACAGAAAAAAATTGATGAAACTTCTGAGCAGGAACAAAAACATAAAGAAACCAACAATAGCAATGC
TCAGAACCCCAGCGAAGAAGAGGGTGAAGGGCAAGATGAGGACATTTTACCTCTAACCCTTGAAGAGAAGGAAAACAAAG
AATACCTAAAATCTCTATTTGAAATCTTGATTCTGATGGGAAAGCAAAACATACCTCTGGATGGACATGAGGCTGATGAA
ATCCCAGAAGGTCTCTTTACTCCAGATAACTTTCAGGCACTGCTGGAGTGTCGGATAAATTCTGGTGAAGAGGTTCTGAG
AAAGCGGTTTGAGACAACAGCAGTTAACACGTTGTTTTGTTCAAAAACACAGCAGAGGCAGATGCTAGAGATCTGTGAGA
GCTGTATTCGAGAAGAAACTCTCAGGGAAGTGAGAGACTCACACTTCTTTTCCATTATCACTGACGATGTAGTGGACATA
GCAGGGGAAGAGCACCTACCTGTGTTGGTGAGGTTTGTTGATGAATCTCATAACCTAAGAGAGGAATTTATAGGCTTCCT
GCCTTATGAAGCCGATGCAGAAATTTTGGCTGTGAAATTTCACACTATGATAACTGAGAAGTGGGGATTAAATATGGAGT
ATTGTCGTGGCCAGGCTTACATTGTCTCTAGTGGATTTTCTTCCAAAATGAAAGTTGTTGCTTCTAGACTTTTAGAGAAA
TATCCCCAAGCTATCTACACACTCTGCTCTTCCTGTGCCTTAAATATGTGGTTGGCAAAATCAGTACCTGTTATGGGAGT
ATCTGTTGCATTAGGAACAATTGAGGAAGTTTGTTCTTTTTTCCATCGATCACCACAACTGCTTTTAGAACTTGACAACG
TAATTTCTGTTCTTTTTCAGAACAGTAAAGAAAGGGGTAAAGAACTGAAGGAAATCTGCCATTCTCAGTGGACAGGCAGG
CATGATGCTTTTGAAATTTTAGTGGAACTCCTGCAAGCACTTGTTTTATGTTTAGATGGTATAAATAGTGACACAAATAT
TAGATGGAATAACTATATAGCTGGCCGAGCATTTGTACTCTGCAGTGCAGTGTCAGATTTTGATTTCATTGTTACTATTG
TTGTTCTTAAAAATGTCCTATCTTTTACAAGAGCCTTTGGGAAAAACCTCCAGGGGCAAACCTCTGATGTCTTCTTTGCA
GCCGGTAGCTTGACTGCAGTACTGCATTCACTCAACGAAGTGATGGAAAATATTGAAGTTTATCATGAATTTTGGTTTGA
GGAAGCCACAAATTTGGCAACCAAACTTGATATTCAAATGAAACTCCCTGGGAAATTCCGCAGAGCTCACCAGGGTAACT
TGGAATCTCAGCTAACCTCTGAGAGTTACTATAAAGAAACCCTAAGTGTCCCAACAGTGGAGCACATTATTCAGGAACTT
AAAGATATATTCTCAGAACAGCACCTCAAAGCTCTTAAATGCTTATCTCTGGTACCCTCAGTCATGGGACAACTCAAATT
CAATACGTCGGAGGAACACCATGCTGACATGTATAGAAGTGACTTACCCAATCCTGACACGCTGTCAGCTGAGCTTCATT
GTTGGAGAATCAAATGGAAACACAGGGGGAAAGATATAGAGCTTCCGTCCACCATCTATGAAGCCCTCCACCTGCCTGAC
ATCAAGTTTTTTCCTAATGTGTATGCATTGCTGAAGGTCCTGTGTATTCTTCCTGTGATGAAGGTTGAGAATGAGCGGTA
TGAAAATGGACGAAAGCGTCTTAAAGCATATTTGAGGAACACTTTGACAGACCAAAGGTCAAGTAACTTGGCTTTGCTTA
ACATAAATTTTGATATAAAACACGACCTGGATTTAATGGTGGACACATATATTAAACTCTATACAAGTAAGTCAGAGCTT
CCTACAGATAATTCCGAAACTGTGGAAAATACCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 12 .32 RPM
SRP007412_cerebellum 10 .43 RPM
SRP007412_heart 9 .04 RPM
SRP007412_kidney 9 .94 RPM
SRP007412_liver 5 .86 RPM
SRP007412_testis 12 .65 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000024488 possible_ortholog 1 retrogene
retro_acar_167,
Bos taurus ENSBTAG00000031609 ortholog_one2many 2 retrogenes
retro_btau_1797, retro_btau_780,
Canis familiaris ENSCAFG00000005274 ortholog_one2many 1 retrogene
retro_cfam_663,
Equus caballus ENSECAG00000021982 ortholog_one2many 1 retrogene
retro_ecab_150,
Homo sapiens ENSG00000137492 ortholog_one2one 1 retrogene
retro_hsap_4080,
Mustela putorius furo ENSMPUG00000008784 ortholog_one2many 1 retrogene
retro_mputfur_1571,
Tursiops truncatus ENSTTRG00000013287 ortholog_many2many 1 retrogene
retro_ttru_126,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2766 97.68 100.00
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Download FASTA sequences of all ENSPTRG00000004091 retrocopies