Parental gene:

POLR2C, ENSCAFG00000008720

Aliases:None
Description:polymerase (RNA) II (DNA directed) polypeptide C, 33kDa [Source:HGNC Symbol;Acc:9189]
Organism:Dog (Canis familiaris)
Coordinates:2:58954431..58962448(-)


>ENSCAFG00000008720
ATGCCGTATGCCAACCAGCCCACCGTGCGGATCACCGAGCTTACCGACGAGAATGTCAAGTTCATCATCGAGAACACGGA
CCTGGCGGTGGCCAACTCCATCCGGAGGGTCTTCATCGCCGAGGTGCCCATAATAGCCATTGACTGGGTCCAAATTGATG
CCAATTCCTCAGTCCTTCATGATGAGTTCATCGCTCACAGACTTGGACTAATCCCCCTGACTAGTGATGACATTGTGGAC
AAGCTGCAGTATTCCCGGGACTGCACATGTGAGGAGTTCTGCCCCGAGTGCTCGGTGGAGTTCACCCTTGATGTGCGGTG
CAATGAAGACCAGACTCGGCACGTCACGTCTCGAGACCTCATCTCCAACAGCCCTCGGGTCATTCCGGTGACATCCCGGA
ACCGAGATAATGACCCCAATGACTATGTGGAGCAGGACGACATCCTCATTGTCAAGCTGAGGAAAGGCCAGGAGCTAAGA
CTTCGAGCCTATGCCAAAAAGGGCTTTGGCAAGGAGCATGCTAAGTGGAACCCTACTGCAGGGGTAGCTTTTGAATATGA
TCCTGACAATGCCCTGAGGCACACCGTGTACCCCAAGCCCGAGGAATGGCCCAAGAGTGAGTACTCAGAGCTGGATGAAG
ATGAGTCACAGGCTCCCTACGACCCCAACGGCAAGCCAGAAAGGTTTTATTACAACGTGGAGTCCTGTGGCTCTCTGCGC
CCTGAAACAATTGTCCTCTCAGCCCTCTCTGGATTAAAGAAGAAACTAAGTGATCTACAGACCCAGTTAAGCCACGAGAT
CCAGAGTGATGTACTAACCATAAACTAG

Library Parental gene expression (RPM)
SRP012049_cerebellum 10 .88 RPM
SRP017611_brain 9 .37 RPM
SRP017611_kidney 6 .47 RPM
SRP017611_liver 3 .05 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000002986 ortholog_one2one 1 retrogene
retro_chof_1988,
Callithrix jacchus ENSCJAG00000012016 ortholog_one2one 1 retrogene
retro_cjac_2026,
Dipodomys ordii ENSDORG00000000081 ortholog_one2one 1 retrogene
retro_dord_704,
Echinops telfairi ENSETEG00000004185 ortholog_one2one 1 retrogene
retro_etel_1953,
Homo sapiens ENSG00000102978 ortholog_one2one 1 retrogene
retro_hsap_2496,
Gorilla gorilla ENSGGOG00000012415 ortholog_one2one 1 retrogene
retro_ggor_1557,
Myotis lucifugus ENSMLUG00000015833 ortholog_one2many 2 retrogenes
retro_mluc_129, retro_mluc_236,
Macaca mulatta ENSMMUG00000020474 ortholog_one2one 1 retrogene
retro_mmul_1674,
Mus musculus ENSMUSG00000031783 ortholog_one2one 1 retrogene
retro_mmus_1723,
Nomascus leucogenys ENSNLEG00000003034 ortholog_one2one 1 retrogene
retro_nleu_1431,
Otolemur garnettii ENSOGAG00000016866 ortholog_one2many 1 retrogene
retro_ogar_3361,
Ochotona princeps ENSOPRG00000006979 ortholog_one2one 1 retrogene
retro_opri_445,
Pongo abelii ENSPPYG00000007390 ortholog_one2one 1 retrogene
retro_pabe_1839,
Pan troglodytes ENSPTRG00000008157 ortholog_one2one 1 retrogene
retro_ptro_1448,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_688 86.07 100.00
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Download FASTA sequences of all ENSCAFG00000008720 retrocopies