Parental gene:

POLR2C, ENSPTRG00000008157

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:16:56551574..56561246(+)


>ENSPTRG00000008157
ATGCCGTACGCTAACCAGCCTACCGTGCGGATCACGGAGCTCACTGACGAGAATGTCAAGTTCATCATCGAGAACACCGA
CCTGGCGGTGGCCAATTCGATTCGGAGGGTCTTCATCGCTGAGGTGCCCATAATAGCCATTGACTGGGTTCAGATTGATG
CCAATTCCTCAGTCCTTCATGATGAATTCATCGCGCACAGGCTTGGATTAATTCCCCTCATTAGTGATGACATTGTGGAC
AAGCTGCAGTACTCTCGGGACTGCACATGTGAGGAGTTCTGCCCCGAGTGCTCGGTGGAGTTCACCCTCGATGTGCGGTG
CAATGAAGACCAGACGCGACATGTCACTTCTCGAGACCTCATCTCCAACAGCCCCCGGGTCATTCCGGTGACATCCCGGA
ACCGAGATAATGACCCCAATGACTACGTGGAGCAGGATGACATCCTCATCGTCAAGTTGAGAAAGGGCCAGGAGCTGAGA
CTTCGAGCCTATGCCAAAAAGGGCTTTGGCAAGGAGCATGCCAAGTGGAACCCTACTGCAGGGGTGGCTTTTGAATACGA
TCCAGACAATGCCCTGAGGCACACAGTGTACCCCAAGCCCGAGGAATGGCCAAAGAGTGAGTACTCGGAGCTGGATGAGG
ATGAGTCGCAGGCTCCCTATGACCCCAACGGCAAGCCAGAAAGGTTTTATTACAACGTGGAGTCCTGTGGCTCTCTGCGT
CCTGAAACCATTGTCCTGTCAGCCCTCTCAGGATTGAAGAAGAAACTGAGTGATTTACAAACTCAATTAAGCCACGAGAT
CCAGAGTGATGTGCTAACCATAAATTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 48 .96 RPM
SRP007412_cerebellum 59 .65 RPM
SRP007412_heart 34 .45 RPM
SRP007412_kidney 71 .47 RPM
SRP007412_liver 52 .05 RPM
SRP007412_testis 35 .09 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000008720 ortholog_one2one 1 retrogene
retro_cfam_688,
Choloepus hoffmanni ENSCHOG00000002986 ortholog_one2one 1 retrogene
retro_chof_1988,
Callithrix jacchus ENSCJAG00000012016 ortholog_one2one 1 retrogene
retro_cjac_2026,
Dipodomys ordii ENSDORG00000000081 ortholog_one2one 1 retrogene
retro_dord_704,
Echinops telfairi ENSETEG00000004185 ortholog_one2one 1 retrogene
retro_etel_1953,
Homo sapiens ENSG00000102978 ortholog_one2one 1 retrogene
retro_hsap_2496,
Gorilla gorilla ENSGGOG00000012415 ortholog_one2one 1 retrogene
retro_ggor_1557,
Myotis lucifugus ENSMLUG00000015833 ortholog_one2many 2 retrogenes
retro_mluc_129, retro_mluc_236,
Macaca mulatta ENSMMUG00000020474 ortholog_one2one 1 retrogene
retro_mmul_1674,
Mus musculus ENSMUSG00000031783 ortholog_one2one 1 retrogene
retro_mmus_1723,
Nomascus leucogenys ENSNLEG00000003034 ortholog_one2one 1 retrogene
retro_nleu_1431,
Otolemur garnettii ENSOGAG00000016866 ortholog_one2many 1 retrogene
retro_ogar_3361,
Ochotona princeps ENSOPRG00000006979 ortholog_one2one 1 retrogene
retro_opri_445,
Pongo abelii ENSPPYG00000007390 ortholog_one2one 1 retrogene
retro_pabe_1839,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1448 78.45 65.45
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Download FASTA sequences of all ENSPTRG00000008157 retrocopies