Parental gene:

OTUB1, ENSCAFG00000014729

Aliases:None
Description:Canis lupus familiaris OTU domain, ubiquitin aldehyde binding 1 (OTUB1), mRNA. [Source:RefSeq mRNA;Acc:NM_001251947]
Organism:Dog (Canis familiaris)
Coordinates:18:53034386..53041470(-)


>ENSCAFG00000014729
AAGGCGGCGGAGGAGCCTCAGCAGCAGAAGCAGGAGCTCTTTGGCTTCCTTCTTCCAGGTGTTAACTGTCTTGCTTATGA
TGAAGCCATCATGGCTCAGCAGGACCGAATTCAGCAAGAGATTGCTGTGCAGAACCCTCTGGTCTCAGAGCGGCTGGAGC
TTTCGGTCCTGTACAAGGAGTATGCTGAGGATGACAACATCTATCAACAGAAGATCAAGGACCTCCACAAAAAGTACTCC
TACATCCGCAAGACCAGGCCTGATGGAAACTGTTTCTACCGAGCTTTCGGATTCTCCCACTTGGAGGCGCTGCTGGATGA
CAGCAAGGAATTGCAGCGGTTTAAGGCTGTGTCTGCCAAGAGCAAAGAGGACCTGGTGTCCCAGGGCTTCACTGAATTCA
CAATCGAGGATTTCCACAACACGTTCATGGACCTGATCGAGCAGGTGGAGAAGCAGACCTCTGTAGCTGACCTGCTGGCC
TCCTTCAACGACCAGAGTACCTCGGACTACCTGGTGGTGTACCTGCGGCTGCTCACCTCCGGCTACCTGCAGCGCGAGAG
CAAGTTCTTCGAGCACTTCATCGAGGGCGGGCGGACAGTCAAGGAGTTCTGCCAGCAGGAGGTGGAGCCCATGTGCAAGG
AGAGCGACCACATTCACATCATCGCACTGGCCCAGGCTCTGAGCGTCTCCATCCAGGTGGAGTACATGGACCGCGGCGAG
GGCGGCACCACCAACCCGCACATCTTCCCCGAGGGCTCTGAGCCCAAGGTGTACCTTCTCTACCGGCCTGGACACTACGA
TATCCTCTACAAATAG

Library Parental gene expression (RPM)
SRP012049_cerebellum 36 .03 RPM
SRP017611_brain 42 .87 RPM
SRP017611_kidney 19 .75 RPM
SRP017611_liver 4 .57 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000018084 ortholog_one2one 1 retrogene
retro_amel_1270,
Bos taurus ENSBTAG00000003967 ortholog_one2one 1 retrogene
retro_btau_1119,
Equus caballus ENSECAG00000002621 ortholog_one2one 1 retrogene
retro_ecab_760,
Myotis lucifugus ENSMLUG00000012235 ortholog_one2many 2 retrogenes
retro_mluc_1257, retro_mluc_614,
Mustela putorius furo ENSMPUG00000013314 ortholog_one2one 1 retrogene
retro_mputfur_1057,
Pteropus vampyrus ENSPVAG00000017099 ortholog_one2one 2 retrogenes
retro_pvam_131, retro_pvam_274,
Rattus norvegicus ENSRNOG00000021175 ortholog_one2one 1 retrogene
retro_rnor_2431,
Sarcophilus harrisii ENSSHAG00000004156 ortholog_one2many 1 retrogene
retro_shar_87,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1376 97.78 99.63
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_cfam_2023 79.21 72.69
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCAFG00000014729 retrocopies