Parental gene:

ARPC1B, ENSCAFG00000015081

Aliases:None
Description:actin related protein 2/3 complex, subunit 1B, 41kDa [Source:HGNC Symbol;Acc:704]
Organism:Dog (Canis familiaris)
Coordinates:6:10192600..10198294(-)


>ENSCAFG00000015081
ATGGCCTACCACAGCTTCCTGGTGGAGCCCATCAGCTGCCACGCCTGGAACAAGGACCGCACCCAGATTGCCATCTGCCC
CAACAACCACGAGGTGCACATCTATGAGAAGAGTGGGGCCAAGTGGGTCAAGGTGCATGAGCTCAAGGAGCACAATGGGC
AGGTGACAGGCATTGACTGGGCCCCTGAGAGTAACCGAATTGTGACCTGTGGCACAGACCGCAATGCCTATGTATGGACG
CTGAAGGGCCGCACATGGAAGCCCACACTAGTCATCCTGCGGATCAACCGGGCTGCCCGCTGTGTGCGCTGGGCCCCCCA
TGAGAACAAGTTTGCTGTGGGAAGTGGCTCCCGTGTCATCTCCATCTGCTATTTTGAGCAGGAAAATGACTGGTGGGTGT
GCAAGCACATCAAGAAGCCCATTCGCTCCACGGTCCTCAGCCTGGACTGGCACCCCAACAATGTGCTCTTGGCCGCGGGC
TCGTGTGACTTCAAGTGCAGGATCTTCTCGGCCTACATCAAGGAGGTGGAGGAGCGGCCAGCACCCACCCCGTGGGGCTC
CAAGATGCCCTTTGGGGAGCTGATGTTTGAGTCTAGCAGTAGCTGTGGCTGGGTGCACGGCGTCTGCTTTTCGGCCAGTG
GTAGCCGCGTGGCCTGGGTCAGCCACGACAGCACCATGTGCCTAGCCGATGCCGACAAGAAAATGGCTGTTGCCACTCTG
GCCTCTGAAACGCTGCCACTGCTGGCCCTGACCTTCATCACAGAAAACAGTCTGGTGGCAGCGGGCCACGACTGTTTTCC
GGTGCTGTTTACCTATGACAGCACCACAGGGACACTGAGTTCTGGTGGGCGGCTGGACGTGCCCAAGCAGAGCTCACAGC
GTGGCCTGACCGCCCGAGAGCGCTTCCAGAACCTGGACAAGAAGGCGAGCTCAGAGGGCAGCGTGGCTTCTGGCTCCGGC
CTGGACTCACTGCATAAGAACAGCGTGAGCCAGATCTCGGTGCTCAGCGGGGGCAAGGCTGAGTGCTCACAGTTCTGCAC
CACAGGAATGGATGGTGGCATGAGCATCTGGGATGTGAAGAGCTTGGAATCAGCCTTGAAGGACCTCAAGATCAAATGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 60 .69 RPM
SRP017611_brain 11 .99 RPM
SRP017611_kidney 631 .98 RPM
SRP017611_liver 16 .82 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000046248 ortholog_one2one 2 retrogenes
retro_btau_1547, retro_btau_473,
Callithrix jacchus ENSCJAG00000015849 ortholog_one2one 1 retrogene
retro_cjac_2365,
Echinops telfairi ENSETEG00000009924 ortholog_one2one 2 retrogenes
retro_etel_1076, retro_etel_1275,
Gorilla gorilla ENSGGOG00000013186 ortholog_one2one 2 retrogenes
retro_ggor_1337, retro_ggor_1455,
Microcebus murinus ENSMICG00000017424 ortholog_one2one 1 retrogene
retro_mmur_602,
Myotis lucifugus ENSMLUG00000010933 ortholog_one2one 1 retrogene
retro_mluc_974,
Mustela putorius furo ENSMPUG00000016522 ortholog_one2one 1 retrogene
retro_mputfur_1578,
Mus musculus ENSMUSG00000029622 ortholog_one2one 2 retrogenes
retro_mmus_1340, retro_mmus_3623,
Otolemur garnettii ENSOGAG00000010872 ortholog_one2one 2 retrogenes
retro_ogar_2380, retro_ogar_3087,
Rattus norvegicus ENSRNOG00000000991 ortholog_one2one 2 retrogenes
retro_rnor_1105, retro_rnor_967,
Sus scrofa ENSSSCG00000007625 ortholog_one2one 1 retrogene
retro_sscr_374,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1568 93.29 75.27
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Download FASTA sequences of all ENSCAFG00000015081 retrocopies