Parental gene:

C1QBP, ENSCAFG00000015542

Aliases:None
Description:complement component 1, q subcomponent binding protein [Source:HGNC Symbol;Acc:1243]
Organism:Dog (Canis familiaris)
Coordinates:5:31354123..31359432(+)


>ENSCAFG00000015542
ATGCTACCGCTGCTGCGCCGAGTGCCCCGCGCCCTGGGCTCGGCGGTCGCCGGGCTCCGCGCCGCCCCCGCCCTGCCGCC
TCCGACCCTGCTGCGGCCGGCGCCCCGGCCGTGCGTGCGGCCCTTCGGGCTGCTCCCTGTGCGCGCGGGCCTCCTGCGCT
CCCGCGGGCCCTGCGGCTGCGGCTGCGGCGGGCTGCACACCCAGGGGGACAAAGCTTTCGTCGAGTTCCTGAATGATGAG
ATTAAGGAGGAAAAGAAAATACAGAAGCACAAGTCCCTCCCCAAAATGTCTGGGGGCTGGGAGCTAGACATGAATGGGAC
GGAGGCCAAGTTAGTGCGGAAAGTAGCTGGAGAAAAGATCACCGTCACTTTCAACATCAACAACAGCATCCCGCCGACGT
TTGAGGGGGAGGAGGAGCCGGCCCAGGGGCAGAAGGCGGATGAGCAGGAGCCTGAACTGACATCCACTCCCAACTTCGTG
GTGGAAGTCATCAAGGATGGTGGCAAGAGGGCTCTGGTACTGGACTGTCACTACCCGGAAGACGAGGTGGGGCAAGAGGA
GGAGGATGAGAGTGACATCTTCTCCATCAGGGAGGTGAGCTTCCAGGCCGTGGGCGAGTCGGAGTGGAAGGACACGAATT
ACACGCTCAACACCGACTCCCTGGACTGGGCCCTGTATGACCACCTGATGGACTTCCTGGCCGACCGGGGGGTGGATAAC
ACCTTTGCGGATGAGCTGGTGGAGCTCAGCACAGCCCTGGAGCACCAAGAATACATCACTTTCCTTGAGGATCTCAAAGG
TTTTGTCAAGAGCCAGTAG

Library Parental gene expression (RPM)
SRP012049_cerebellum 80 .68 RPM
SRP017611_brain 59 .62 RPM
SRP017611_kidney 126 .46 RPM
SRP017611_liver 46 .77 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006043 ortholog_one2one 2 retrogenes
retro_amel_1734, retro_amel_356,
Felis catus ENSFCAG00000026474 ortholog_one2one 3 retrogenes
retro_fcat_1135, retro_fcat_1763, retro_fcat_892,
Macropus eugenii ENSMEUG00000014882 ortholog_one2one 13 retrogenes
retro_meug_1068, retro_meug_1347, retro_meug_1363, retro_meug_1446, retro_meug_1901, retro_meug_1940, retro_meug_1970, retro_meug_2069, retro_meug_2128, retro_meug_434, retro_meug_580, retro_meug_988, retro_meug_989,
Mustela putorius furo ENSMPUG00000011246 ortholog_one2one 1 retrogene
retro_mputfur_1213,
Ochotona princeps ENSOPRG00000013150 ortholog_one2one 1 retrogene
retro_opri_408,
Sarcophilus harrisii ENSSHAG00000002441 ortholog_one2one 2 retrogenes
retro_shar_620, retro_shar_813,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_319 71.22 74.63
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2. retro_cfam_325 65.62 57.35
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3. retro_cfam_1595 61.45 60.29
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Download FASTA sequences of all ENSCAFG00000015542 retrocopies