Parental gene: | EFCAB2, ENSCAFG00000029154 |
| Aliases: | None |
| Description: | EF-hand calcium binding domain 2 [Source:HGNC Symbol;Acc:28166] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 7:36019017..36038593(+) |
>ENSCAFG00000029154
AGAGAGATCGGAACAATTATCAGGTCACTAGGGTGCTGCCCAAGCGAAGGAGAGCTGCATGACCTGATCGTAGAGGTAGA
GGAGGAAGAACCCACTGGATACATTCGATTTGAAAAATTTCTTCCAGTGATGACCAAAGTACTACTAGAAAAAAGGTACA
GACCAATTCCAGAAGATATCCTTCTTCGAGCATTTGAGGTGTTAGATCCATCCAAACGTGGATTTCTAACTAAGGAAGAA
TTGATCAAGTATATGACTGAAGAAGGTGAGCCTTTTTCTCAGGAAGAAATGGAAGAAATGTTGTCCGCTGCAATTGACCC
AGAATCGAATTCCATTCGTTACAAGGACTACATAGCCATGATGGTGGTAGATGACGGCTAG
AGAGAGATCGGAACAATTATCAGGTCACTAGGGTGCTGCCCAAGCGAAGGAGAGCTGCATGACCTGATCGTAGAGGTAGA
GGAGGAAGAACCCACTGGATACATTCGATTTGAAAAATTTCTTCCAGTGATGACCAAAGTACTACTAGAAAAAAGGTACA
GACCAATTCCAGAAGATATCCTTCTTCGAGCATTTGAGGTGTTAGATCCATCCAAACGTGGATTTCTAACTAAGGAAGAA
TTGATCAAGTATATGACTGAAGAAGGTGAGCCTTTTTCTCAGGAAGAAATGGAAGAAATGTTGTCCGCTGCAATTGACCC
AGAATCGAATTCCATTCGTTACAAGGACTACATAGCCATGATGGTGGTAGATGACGGCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 3 .65 RPM |
| SRP017611_kidney | 3 .96 RPM |
| SRP017611_liver | 0 .44 RPM |
| SRP012049_cerebellum | 10 .37 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000019170 | within_species_paralog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000016907 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000022403 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000029593 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000006254 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_781 | 97.62 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000029154 retrocopies