Parental gene:

EFCAB2, ENSCAFG00000029154

Aliases:None
Description:EF-hand calcium binding domain 2 [Source:HGNC Symbol;Acc:28166]
Organism:Dog (Canis familiaris)
Coordinates:7:36019017..36038593(+)


>ENSCAFG00000029154
AGAGAGATCGGAACAATTATCAGGTCACTAGGGTGCTGCCCAAGCGAAGGAGAGCTGCATGACCTGATCGTAGAGGTAGA
GGAGGAAGAACCCACTGGATACATTCGATTTGAAAAATTTCTTCCAGTGATGACCAAAGTACTACTAGAAAAAAGGTACA
GACCAATTCCAGAAGATATCCTTCTTCGAGCATTTGAGGTGTTAGATCCATCCAAACGTGGATTTCTAACTAAGGAAGAA
TTGATCAAGTATATGACTGAAGAAGGTGAGCCTTTTTCTCAGGAAGAAATGGAAGAAATGTTGTCCGCTGCAATTGACCC
AGAATCGAATTCCATTCGTTACAAGGACTACATAGCCATGATGGTGGTAGATGACGGCTAG

Library Parental gene expression (RPM)
SRP012049_cerebellum 10 .37 RPM
SRP017611_brain 3 .65 RPM
SRP017611_kidney 3 .96 RPM
SRP017611_liver 0 .44 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000019170 within_species_paralog 1 retrogene
retro_cfam_199,
Callithrix jacchus ENSCJAG00000016907 ortholog_one2one 1 retrogene
retro_cjac_3944,
Equus caballus ENSECAG00000022403 ortholog_one2one 1 retrogene
retro_ecab_874,
Oryctolagus cuniculus ENSOCUG00000029593 ortholog_one2one 1 retrogene
retro_ocun_612,
Tarsius syrichta ENSTSYG00000006254 ortholog_one2one 2 retrogenes
retro_tsyr_1584, retro_tsyr_317,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_781 97.62 100.00
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Download FASTA sequences of all ENSCAFG00000029154 retrocopies