Parental gene:

ATPIF1, ENSCAFG00000032458

Aliases:None
Description:ATPase inhibitory factor 1 [Source:HGNC Symbol;Acc:871]
Organism:Dog (Canis familiaris)
Coordinates:2:72188685..72191270(-)


>ENSCAFG00000032458
ATGGCTGTCTCGGCGGTGTCCTCGCGGGTGTGGCTGGGCATGTGGGGTGTTAGGGCCCTGCAAACCCGAGGCTTCGGCTC
CGAACGGTCAGAGGACCCGGGCTCCGCGGGCTCGATCCGGGAGGCAGGTGGGGCCTTCGGAAAGAGAGAGCAAGCTGAAG
AGGAACGATACTTCCGAGCACGCACTAGAGAACAACTGGCAGCCTTGAAGAAACACCATGAAGATGAGATCAGTCATCAT
ATAAAGGAGATTGAGCGTCTGCAGAAAGAAATTGAGCGGCACAAGAAGAAAATCAAAAATCTAAAATCTGATGATGATTA
A

Library Parental gene expression (RPM)
SRP012049_cerebellum 90 .76 RPM
SRP017611_brain 37 .24 RPM
SRP017611_kidney 172 .22 RPM
SRP017611_liver 30 .53 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000009581 ortholog_one2one 1 retrogene
retro_cjac_1406,
Dasypus novemcinctus ENSDNOG00000015460 ortholog_one2one 1 retrogene
retro_dnov_2592,
Myotis lucifugus ENSMLUG00000000170 ortholog_one2many 1 retrogene
retro_mluc_363,
Mustela putorius furo ENSMPUG00000015536 ortholog_one2one 1 retrogene
retro_mputfur_1570,
Mus musculus ENSMUSG00000054428 ortholog_one2one 2 retrogenes
retro_mmus_2516, retro_mmus_908,
Otolemur garnettii ENSOGAG00000010337 ortholog_one2many 2 retrogenes
retro_ogar_116, retro_ogar_268,
Pteropus vampyrus ENSPVAG00000017615 ortholog_one2one 1 retrogene
retro_pvam_817,
Rattus norvegicus ENSRNOG00000013300 ortholog_one2many 1 retrogene
retro_rnor_2655,
Sorex araneus ENSSARG00000010860 ortholog_one2one 1 retrogene
retro_sara_458,
Ictidomys tridecemlineatus ENSSTOG00000020766 ortholog_one2one 1 retrogene
retro_itri_1240,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_651 91.09 94.34
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2. retro_cfam_1777 72.97 99.06
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Download FASTA sequences of all ENSCAFG00000032458 retrocopies