Parental gene:

ATPIF1, ENSCJAG00000009581

Aliases:None
Description:ATPase inhibitory factor 1 [Source:HGNC Symbol;Acc:871]
Organism:Marmoset (Callithrix jacchus)
Coordinates:7:62419705..62422026(+)


>ENSCJAG00000009581
ATGGCAGTTACGGCGTTGGCGGCGAGGACGTGGCTTGGCGTTTGGGGCGTGAGGACCATGCAAGCCCGAAGCTTCGGCTC
GGATCAGTCCGAGAATCTCGATCGGGGCGCGGGCTCCATCCGGGAAGCCGGTGGGGCCTTTGGAAAGAGAGAGCAGGCTG
AAGAGGAACGATATTTCCGAGCACAGGCTAGAGAACAACTGGCAGCTTTGAAAAAACACCATGAAGACGAGATCGTTCAT
CATAAGAAGGAGATTGAGCGTCTGCAGAAAGAAATTGAGCGGCATAAGCAGAAGATCAAAATACTAAAAGATGATGATTA
A

Library Parental gene expression (RPM)
SRP051959_spleen 13 .13 RPM
SRP051959_skeletal_muscle 35 .68 RPM
SRP051959_lymph_node 9 .06 RPM
SRP051959_lung 14 .28 RPM
SRP051959_liver 14 .82 RPM
SRP051959_kidney 24 .01 RPM
SRP051959_heart 25 .29 RPM
SRP051959_colon 9 .45 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000032458 ortholog_one2one 2 retrogenes
retro_cfam_1777, retro_cfam_651,
Dasypus novemcinctus ENSDNOG00000015460 ortholog_one2one 1 retrogene
retro_dnov_2592,
Myotis lucifugus ENSMLUG00000000170 ortholog_one2many 1 retrogene
retro_mluc_363,
Mustela putorius furo ENSMPUG00000015536 ortholog_one2one 1 retrogene
retro_mputfur_1570,
Mus musculus ENSMUSG00000054428 ortholog_one2one 2 retrogenes
retro_mmus_2516, retro_mmus_908,
Otolemur garnettii ENSOGAG00000010337 ortholog_one2many 2 retrogenes
retro_ogar_116, retro_ogar_268,
Rattus norvegicus ENSRNOG00000013300 ortholog_one2many 1 retrogene
retro_rnor_2655,
Sorex araneus ENSSARG00000010860 ortholog_one2one 1 retrogene
retro_sara_458,
Ictidomys tridecemlineatus ENSSTOG00000020766 ortholog_one2one 1 retrogene
retro_itri_1240,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1406 86.79 100.00
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Download FASTA sequences of all ENSCJAG00000009581 retrocopies