Parental gene:

RPS15A, ENSCHOG00000012210

Aliases:None
Description:ribosomal protein S15a [Source:HGNC Symbol;Acc:10389]
Organism:Sloth (Choloepus hoffmanni)
Coordinates:GeneScaffold_3426:3400..6387(-)


>ENSCHOG00000012210
GTGCGCATGAACGTCCTGGCTGATGCTCTCAAGAGCATCATCAATGCGGAGAAGAGAGGCAAACGCCAAGTTCTTATCAG
GCCGCGCTCCGAAGACATCGACCGCTTTCTTACTGTGATGATGATTCTTGGCTACATTGGTGAATTTGAAATCATCGATG
ATCACAGAGCTGGGAAAATTGTTGTGAACCTCACAGGCAGGTTAAACAAGTGTGGAGTGATTAGTCCCAGATTTGATGTG
CAACTCAAAGATCTAGAAAAATGGCAGAATAATCTGCTCCCATCCCGTCAGTTTGGTTTCATTGTACTGACGACCTCAGC
TGGCATCATGGACCATGAGGAAGCAAGACGAAAACACACAGGAGGAAAAATCCTGGGATTCTTTTTTTAG

Species Parental gene accession Homology type Retrogenes number
Gadus morhua ENSGMOG00000005862 ortholog_one2many 1 retrogene
retro_gmor_16,
Latimeria chalumnae ENSLACG00000011476 ortholog_one2one 1 retrogene
retro_lcha_55,
Loxodonta africana ENSLAFG00000026996 ortholog_one2one 13 retrogenes
retro_lafr_1161, retro_lafr_1201, retro_lafr_210, retro_lafr_236, retro_lafr_247, retro_lafr_309, retro_lafr_323, retro_lafr_356, retro_lafr_571, retro_lafr_613, retro_lafr_629, retro_lafr_759, retro_lafr_956,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_chof_343 67.23 91.47
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2. retro_chof_448 69.92 95.35
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3. retro_chof_754 88.60 88.37
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4. retro_chof_1122 61.80 68.99
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5. retro_chof_1141 89.15 100.00
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6. retro_chof_1376 67.89 84.50
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7. retro_chof_1676 64.47 57.36
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8. retro_chof_1915 64.96 88.37
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9. retro_chof_2388 66.10 89.15
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10. retro_chof_2522 65.14 84.50
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11. retro_chof_2526 76.40 66.67
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12. retro_chof_2612 70.00 100.00
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Download FASTA sequences of all ENSCHOG00000012210 retrocopies