Parental gene: | TMED2, ENSCHOG00000012728 |
| Aliases: | None |
| Description: | transmembrane emp24 domain trafficking protein 2 [Source:HGNC Symbol;Acc:16996] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | scaffold_39525:2503..10897(-) |
>ENSCHOG00000012728
ATGGTGACACTCGCCGAGCTGCTGGTGCTCCTGGCTGCGCTCCTGGCCACGGCCTCGGGCTACTTCGTTAGCATCGACGC
ACATGCCGAGGAGTGCTTCTTCGAGCGGGTCACCTCGGGCACCAAGATGGGCCTCATCTTCGAGGTGGCCGAGGGCGGCT
TCTTGGACATCGACGTGGAGCCTGACAATAAAGGAATCTATAAAGGAGACCGAGAGTCCAGTGGGAAATACACATTTGCT
GCTCACATGGATGGAACATATAAGTTTTGTTTTAGCAATAGGATGTCCACCATGACTCCAAAGATAGTGATGTTCACCAT
TGATATTGGGGAGGCCCCAAAAGGACAGGACATGGAAACAGAAGCTCACCAGAACAAGCTAGAAGAAATGATTAATGAGC
TGGCAGTGGCAATGACAGCTGTAAAGCATGAACAGGAGTACATGGAAGTTCGGGAGAGAATACACAGAGCAATCAATGAC
AACACAAACAGCAGAGTGGTCCTTTGGTCCTTCTTTGAAGCTCTTGTTCTAGTTGCCATGACATTGGGACAGATCTACTA
CCTGAAGAGATTTTTTGAAGTCCGGAGGGTTGTTTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000015262 | ortholog_one2one | 2 retrogenes | |
| Bos taurus | ENSBTAG00000039630 | ortholog_one2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000020466 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000000556 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000086598 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000028536 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000031491 | ortholog_one2one | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000001598 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000029390 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000001652 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000009192 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000005090 | ortholog_one2one | 3 retrogenes | |
| Tursiops truncatus | ENSTTRG00000007249 | ortholog_one2one | 7 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_104 | 76.00 | 73.74 | Please wait, loading  |
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| 2. | retro_chof_981 | 97.01 | 100.00 | Please wait, loading |
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| 3. | retro_chof_1277 | 81.56 | 71.21 | Please wait, loading |
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| 4. | retro_chof_2323 | 75.49 | 51.52 | Please wait, loading |
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| 5. | retro_chof_2601 | 77.30 | 71.21 | Please wait, loading |
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| 6. | retro_chof_2709 | 79.43 | 71.21 | Please wait, loading |
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Download FASTA sequences of all ENSCHOG00000012728 retrocopies