Parental gene:

Tmed2, ENSMUSG00000029390

Aliases:Tmed2, 1110032D12Rik, 1810020N21Rik, Rnp24, Sid394, p24beta1
Description:transmembrane emp24 domain trafficking protein 2 [Source:MGI Symbol;Acc:MGI:1929269]
Organism:Mouse (Mus musculus)
Coordinates:5:124540694..124550506(+)


>ENSMUSG00000029390
ATGGTGACGCTCGCCGAGCTGCTGGCGCTGCTGGCCGCGCTGCTGGCCACGGCCTCGGGCTACTTTGTCAGCATCGACGC
GCACGCCGAGGAGTGCTTCTTCGAGCGGGTCACCTCCGGCACCAAGATGGGCCTCATCTTCGAGGTGGCGGAGGGCGGCT
TCCTGGACATCGACGTGGAGATCACAGGACCAGATAATAAAGGAATCTATAAAGGAGACCGGGAGTCCAGCGGGAAGTAC
ACATTTGCAGCCCACATGGATGGGACATACAAGTTCTGCTTTAGCAATAGGATGTCCACTATGACTCCAAAGATAGTAAT
GTTCACCATTGACATTGGGGAGGCTCCCAAAGGACAAGACATGGAGACAGAAGCTCATCAGAACAAGCTAGAAGAAATGA
TTAATGAGCTGGCAGTGGCAATGACAGCCGTAAAGCACGAACAGGAGTACATGGAAGTCCGGGAGAGAATACACAGAGCC
ATCAATGACAACACAAACAGCAGAGTGGTCCTTTGGTCCTTCTTCGAAGCTCTTGTTCTAGTTGCCATGACATTGGGACA
GATCTACTACCTGAAGAGATTTTTTGAAGTCCGGAGGGTTGTTTAA

Library Parental gene expression (RPM)
SRP007412_brain 8 .11 RPM
SRP007412_cerebellum 2 .65 RPM
SRP007412_heart 15 .00 RPM
SRP007412_kidney 10 .38 RPM
SRP007412_liver 8 .98 RPM
SRP007412_testis 1 .83 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000015262 ortholog_one2one 2 retrogenes
retro_amel_1923, retro_amel_337,
Bos taurus ENSBTAG00000039630 ortholog_one2one 2 retrogenes
retro_btau_52, retro_btau_819,
Choloepus hoffmanni ENSCHOG00000012728 ortholog_one2one 6 retrogenes
retro_chof_104, retro_chof_1277, retro_chof_2323, retro_chof_2601, retro_chof_2709, retro_chof_981,
Callithrix jacchus ENSCJAG00000020466 ortholog_one2one 1 retrogene
retro_cjac_1392,
Echinops telfairi ENSETEG00000000556 ortholog_one2one 2 retrogenes
retro_etel_2109, retro_etel_2154,
Homo sapiens ENSG00000086598 ortholog_one2one 1 retrogene
retro_hsap_2793,
Gorilla gorilla ENSGGOG00000028536 ortholog_one2one 1 retrogene
retro_ggor_1943,
Macaca mulatta ENSMMUG00000031491 ortholog_one2one 2 retrogenes
retro_mmul_1439, retro_mmul_613,
Mustela putorius furo ENSMPUG00000001598 ortholog_one2one 1 retrogene
retro_mputfur_1241,
Nomascus leucogenys ENSNLEG00000001652 ortholog_one2one 2 retrogenes
retro_nleu_2454, retro_nleu_2794,
Otolemur garnettii ENSOGAG00000009192 ortholog_one2one 1 retrogene
retro_ogar_2548,
Pongo abelii ENSPPYG00000005090 ortholog_one2one 3 retrogenes
retro_pabe_1919, retro_pabe_2227, retro_pabe_3597,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_1361 96.30 67.16
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2. retro_mmus_3262 100.00 100.00
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Download FASTA sequences of all ENSMUSG00000029390 retrocopies