Parental gene: | APITD1, ENSCJAG00000000135 |
| Aliases: | None |
| Description: | centromere protein S [Source:RefSeq peptide;Acc:NP_001191857] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 7:40550617..40565991(+) |
>ENSCJAG00000000135
ATGGAAGAGGAGGCGGAGGCCGAGGAGCAGCAACGATTTTCTTACCAACAGAGGCTAAAGGCAGCAGTTCACTACACTGT
GGGTTGTCTTTGCGAGGAAGTTGCCTTGGACAAAGAGATGCAGTTCAGCAAACAAACCATTGCGGCCATTTCGGAGCTGA
CTTTTCGACAGTGTGAAAATTTTGCCAAAGACCTTGAAATGTTTGCAAGACATGCAAGAAGAACCACAATTAACACTGAA
GATGTGAAGCTCTTAGCCAGGAGGAGTAATTCACTGCTAAAATACATCACAGACAAAAGTGAAGAGATTGCTCAGATTAA
TGTAGAGCGAAAGGCACGGAAGAAAAAGAAGTCAGAGGATGGAAACCACAATTCAAGAGAGCTGGCCGAGGCTGGAGTAG
TGGAGAGTGAGAAGTAA
ATGGAAGAGGAGGCGGAGGCCGAGGAGCAGCAACGATTTTCTTACCAACAGAGGCTAAAGGCAGCAGTTCACTACACTGT
GGGTTGTCTTTGCGAGGAAGTTGCCTTGGACAAAGAGATGCAGTTCAGCAAACAAACCATTGCGGCCATTTCGGAGCTGA
CTTTTCGACAGTGTGAAAATTTTGCCAAAGACCTTGAAATGTTTGCAAGACATGCAAGAAGAACCACAATTAACACTGAA
GATGTGAAGCTCTTAGCCAGGAGGAGTAATTCACTGCTAAAATACATCACAGACAAAAGTGAAGAGATTGCTCAGATTAA
TGTAGAGCGAAAGGCACGGAAGAAAAAGAAGTCAGAGGATGGAAACCACAATTCAAGAGAGCTGGCCGAGGCTGGAGTAG
TGGAGAGTGAGAAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 1 .79 RPM |
| SRP051959_skeletal_muscle | 0 .33 RPM |
| SRP051959_lymph_node | 2 .58 RPM |
| SRP051959_lung | 1 .32 RPM |
| SRP051959_liver | 0 .71 RPM |
| SRP051959_kidney | 0 .47 RPM |
| SRP051959_heart | 0 .49 RPM |
| SRP051959_colon | 1 .84 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Otolemur garnettii | ENSOGAG00000011167 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3133 | 72.86 | 50.72 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000000135 retrocopies