Parental gene: | GNL3L, ENSCJAG00000000252 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | X:52403860..52428228(+) |
>ENSCJAG00000000252
GTCACAAGCATACATTCAGAAAATAAAAAGCCAGGTGAAGGCTCCAGGGGCTACAGGAAGGTAAGTTGGCCCTACCCTCA
GGCTGCAAAGCAAAATGGGAAGAAAGCAGCCCCCAAAGTGCCCTCTGCACCTCATTTGGTTCACTGCAATGGTCATGCCA
ATCGAGAGGCTGAATTGAAGAAGAAGAGGGTTGAGGAGATGAGGGAGATGCAGCAAGTTGCCCGGGAGCAAGAAAGACAA
AAACGCAGGACCGTGGAGATCTATTGTCAGGACGTCCTGAGACGCCAGGAGGAGTTTGAGCATAAGGAGGAAGTTTTGCA
GGAATTAAATATGTTTCCTCAGCTGGATGACGAGGCCACGAGGAAGGCTTATTACAAGGAGTTCCGTAAGGTGGTGGAAT
ACTCTGATGTGATTCTGGAAGTCCTGGATGCCAGAGACCCATTAGGCTGCCGCTGCTTCCAAATGGAGGAGGCTGTCTTG
CAAGCCCAAGGCAACAAGAAGCTGGTCCTGGTCTTGAACAAGATTGACCTGGTCCCCAAGGAGGTTGTGGAGAAATGGCT
GGATTACCTTCGGAATGAGTTGCCAACCGTGGCTTTCAAAGCCAGTACCCAGCATCAGGTCAAAAACCTGAATCGTTGCA
GTGTACCAGTAAATCAGGCCTCTGAGTCAATGTTGAAAAGCAAAGCCTGCTTTGGAGCTGAAAACCTCATGAGGATTCTG
GGGAACTATTGCCGCCTTGGTGAAGTGCGCACCCACATTCGTGTGGGCGTTGTGGGTCTTCCCAATGTTGGGAAGAGCAG
CCTGATCAATAGCCTGAAGCGCAGCCGCGCATGCAGTGTGGGAGCCGTTCCTGGGATTACCAAATTCATGCAGGAGGTCC
ACCTGGACAAGTTCATCCGGCTGCTGGATGCTCCAGGCATTGTCCCAGGGCCCAACTCAGAGGTGGGCACCATCCTGCGT
AACTGCGTCCACGTGCAGAAGCTGGCAGACCCTGTGACCCCGGTGGAGACCATCCTGCAGCGCTGCAACCTGGAGGAGAT
TTCCAACTACTATGGCATCTCTGGGTTCCAGACCACTGAGCACTTTCTCACGGCAGTGGCCCACCGTTTGGGGAAGAAGA
AGAAGGGAGGCTTATACAGTCAGGAACAGGCGGCCAAAGCTGTCCTAGCTGACTGGGTCAGTGGAAAGATCAGCTTCTAT
ATATCACCACCACCTACTCACACTCTGCCCGCCCATCTCAGTGCTGAGATCGTTAAGGAAATGACCGAGGTCTTTGACAT
CGAGGATACTGAGCAGGCCAATGAGGACACCATGGAATGCTTGGCCACTGGAGAATCTGATGAGCTGTTGGGTGACACGG
ACCCACGTGAAATGGAGATCAAGTTGCTCCATTCTCCGATGATGAAAATAGCAGATGCCATTGAAAATAAAACCACCGTG
TATAAGATTGGAGATCTCACTGGGTATTGCACCAATCCGAACCGTCATCAGATGGGGTGGGCTAAACGCAATGTGAACCA
CCACCCTAAGAACAACAATATGGTGGATGTCTGCTCAGTGGACCGCCGCCCAGTGCTGCAGAGGATCATGGAGACGGATC
CCCTGCAACAGGGCCAGGCTCTGGCATCCGCTCTGAAGAATAAGAAGAAGATGCAGAAACGTGCAGATAAAATTGCCAGC
AAGCTGTCTGATTCCATGATGTCTGCTCTCGACCTCTCTGCCAGTGGTGATGACAGTGTTGGTGACTAA
GTCACAAGCATACATTCAGAAAATAAAAAGCCAGGTGAAGGCTCCAGGGGCTACAGGAAGGTAAGTTGGCCCTACCCTCA
GGCTGCAAAGCAAAATGGGAAGAAAGCAGCCCCCAAAGTGCCCTCTGCACCTCATTTGGTTCACTGCAATGGTCATGCCA
ATCGAGAGGCTGAATTGAAGAAGAAGAGGGTTGAGGAGATGAGGGAGATGCAGCAAGTTGCCCGGGAGCAAGAAAGACAA
AAACGCAGGACCGTGGAGATCTATTGTCAGGACGTCCTGAGACGCCAGGAGGAGTTTGAGCATAAGGAGGAAGTTTTGCA
GGAATTAAATATGTTTCCTCAGCTGGATGACGAGGCCACGAGGAAGGCTTATTACAAGGAGTTCCGTAAGGTGGTGGAAT
ACTCTGATGTGATTCTGGAAGTCCTGGATGCCAGAGACCCATTAGGCTGCCGCTGCTTCCAAATGGAGGAGGCTGTCTTG
CAAGCCCAAGGCAACAAGAAGCTGGTCCTGGTCTTGAACAAGATTGACCTGGTCCCCAAGGAGGTTGTGGAGAAATGGCT
GGATTACCTTCGGAATGAGTTGCCAACCGTGGCTTTCAAAGCCAGTACCCAGCATCAGGTCAAAAACCTGAATCGTTGCA
GTGTACCAGTAAATCAGGCCTCTGAGTCAATGTTGAAAAGCAAAGCCTGCTTTGGAGCTGAAAACCTCATGAGGATTCTG
GGGAACTATTGCCGCCTTGGTGAAGTGCGCACCCACATTCGTGTGGGCGTTGTGGGTCTTCCCAATGTTGGGAAGAGCAG
CCTGATCAATAGCCTGAAGCGCAGCCGCGCATGCAGTGTGGGAGCCGTTCCTGGGATTACCAAATTCATGCAGGAGGTCC
ACCTGGACAAGTTCATCCGGCTGCTGGATGCTCCAGGCATTGTCCCAGGGCCCAACTCAGAGGTGGGCACCATCCTGCGT
AACTGCGTCCACGTGCAGAAGCTGGCAGACCCTGTGACCCCGGTGGAGACCATCCTGCAGCGCTGCAACCTGGAGGAGAT
TTCCAACTACTATGGCATCTCTGGGTTCCAGACCACTGAGCACTTTCTCACGGCAGTGGCCCACCGTTTGGGGAAGAAGA
AGAAGGGAGGCTTATACAGTCAGGAACAGGCGGCCAAAGCTGTCCTAGCTGACTGGGTCAGTGGAAAGATCAGCTTCTAT
ATATCACCACCACCTACTCACACTCTGCCCGCCCATCTCAGTGCTGAGATCGTTAAGGAAATGACCGAGGTCTTTGACAT
CGAGGATACTGAGCAGGCCAATGAGGACACCATGGAATGCTTGGCCACTGGAGAATCTGATGAGCTGTTGGGTGACACGG
ACCCACGTGAAATGGAGATCAAGTTGCTCCATTCTCCGATGATGAAAATAGCAGATGCCATTGAAAATAAAACCACCGTG
TATAAGATTGGAGATCTCACTGGGTATTGCACCAATCCGAACCGTCATCAGATGGGGTGGGCTAAACGCAATGTGAACCA
CCACCCTAAGAACAACAATATGGTGGATGTCTGCTCAGTGGACCGCCGCCCAGTGCTGCAGAGGATCATGGAGACGGATC
CCCTGCAACAGGGCCAGGCTCTGGCATCCGCTCTGAAGAATAAGAAGAAGATGCAGAAACGTGCAGATAAAATTGCCAGC
AAGCTGTCTGATTCCATGATGTCTGCTCTCGACCTCTCTGCCAGTGGTGATGACAGTGTTGGTGACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 32 .40 RPM |
| SRP051959_skeletal_muscle | 34 .18 RPM |
| SRP051959_lymph_node | 28 .86 RPM |
| SRP051959_lung | 23 .13 RPM |
| SRP051959_liver | 19 .10 RPM |
| SRP051959_kidney | 25 .96 RPM |
| SRP051959_heart | 23 .05 RPM |
| SRP051959_colon | 17 .02 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000130119 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000007550 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000010144 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000008231 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000016233 | ortholog_one2one | 1 retrogene | |
| Oryzias latipes | ENSORLG00000014117 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000020383 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1591 | 83.17 | 51.89 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_1853 | 76.64 | 60.14 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000000252 retrocopies