Parental gene: | UBE2S, ENSCJAG00000000874 |
| Aliases: | None |
| Description: | ubiquitin-conjugating enzyme E2S [Source:HGNC Symbol;Acc:17895] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 22:46242300..46248912(-) |
>ENSCJAG00000000874
ATGAACTCCAACGTGGAGAACCTGCCCCCGCACATCATCCGCCTGGTGTACAAGGAGGTGACGACACTGACCACAGACCC
ACCCGATGGCATCAAGGTCTTTCCCAACGAGGAGGACCTCACCGACCTCCAGGTCACCATCGAGGGCCCTGAGGGGACCC
CATATGCTGGAGGTGTGTTCCGCATGAAACTCCTGCTGGGGAAGGACTTCCCTGCCTCCCCACCCAAGGGCTACTTCCTA
ACCAAGATCTTCCACCCGAACGTGGGCGCCAATGGCGAGATCTGCGTCAACGTGCTCAAGAGGGACTGGACAGCTGAGCT
GGGCATCCGACACGTGCTGCTGACCATCAAGTGCCTGCTGATCCACCCTAACCCCGAGTCTGCACTCAACGAGGAGGCGG
GCCGCCTTCTCCTCGAGAACTATGAGGAGTATGCGGCTCGGGCCCGTCTGCTCACAGAGATCCACGGGGGCGCTGGTGGG
CCCAGTGGCAGGGCCGAAGCTGGTCGTGCCCTTGCCAGTGGCACTGCAGCCTCCTCCACCGATCCAGGGGCCCCAGGGGG
CCCAGGAGGAGCTGAGGGTCCCATGGCCAAGAAGCATGCTGGCGAGCGTGACAAGAAGCTGGCGGCCAAGAAAAAGACGG
ACAAGAAGCGGGCACTGCGGCGGCTGTAG
ATGAACTCCAACGTGGAGAACCTGCCCCCGCACATCATCCGCCTGGTGTACAAGGAGGTGACGACACTGACCACAGACCC
ACCCGATGGCATCAAGGTCTTTCCCAACGAGGAGGACCTCACCGACCTCCAGGTCACCATCGAGGGCCCTGAGGGGACCC
CATATGCTGGAGGTGTGTTCCGCATGAAACTCCTGCTGGGGAAGGACTTCCCTGCCTCCCCACCCAAGGGCTACTTCCTA
ACCAAGATCTTCCACCCGAACGTGGGCGCCAATGGCGAGATCTGCGTCAACGTGCTCAAGAGGGACTGGACAGCTGAGCT
GGGCATCCGACACGTGCTGCTGACCATCAAGTGCCTGCTGATCCACCCTAACCCCGAGTCTGCACTCAACGAGGAGGCGG
GCCGCCTTCTCCTCGAGAACTATGAGGAGTATGCGGCTCGGGCCCGTCTGCTCACAGAGATCCACGGGGGCGCTGGTGGG
CCCAGTGGCAGGGCCGAAGCTGGTCGTGCCCTTGCCAGTGGCACTGCAGCCTCCTCCACCGATCCAGGGGCCCCAGGGGG
CCCAGGAGGAGCTGAGGGTCCCATGGCCAAGAAGCATGCTGGCGAGCGTGACAAGAAGCTGGCGGCCAAGAAAAAGACGG
ACAAGAAGCGGGCACTGCGGCGGCTGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 3 .42 RPM |
| SRP051959_skeletal_muscle | 6 .09 RPM |
| SRP051959_lymph_node | 3 .58 RPM |
| SRP051959_lung | 3 .76 RPM |
| SRP051959_liver | 1 .06 RPM |
| SRP051959_kidney | 2 .06 RPM |
| SRP051959_heart | 4 .07 RPM |
| SRP051959_colon | 5 .15 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000005098 | within_species_paralog | 2 retrogenes | |
| Homo sapiens | ENSG00000108106 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000060860 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000011507 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000016930 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_406 | 91.23 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_1995 | 86.36 | 97.30 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cjac_3689 | 90.79 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000000874 retrocopies