Parental gene:

ENSCJAG00000001008

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:ACFV01185852.1:987..11623(-)


>ENSCJAG00000001008
ATGTCTTTCAAAGTATTTGATGAACATGCATACACATTGGAAAAGCATGACATAACAGAATTATACATTGTATATGATCC
TTCAGAGAAAATGATTTACAAATTTATTCGTACCCTGTTTTATGTAAAAAAGCTAAAGGTTGCTGATGCCATCATAACTA
TGGTGTACATTCAACGACTTATACAGTATGCTCATATCTACATTTGTTCAGCCACCTGGAGGAGGATTATCCTCGGAGCC
ATTCTTGTTGTCATCAAGGTTCGGAGCAATGTGGCTGTGTGCAATAGGGACTTATGCAGGCGCTTTGAGAAAACTACCGT
TAACGATCTGAATAAGTTGGAAATGTACTTCTTGAGGCTAATTGGTTATGATACTAACATTTCTAAAAGCGTTTATACCA
GATTCTACTTCCGTCTTCGTGACTTTATAGTCAGCCATGGCCTGAGTTTGCCTACTTACCTTCTTGACAGAAAAAGAGCA
TGGGATCTGCAG

Library Parental gene expression (RPM)
SRP051959_spleen 1 .66 RPM
SRP051959_skeletal_muscle 1 .03 RPM
SRP051959_lymph_node 2 .31 RPM
SRP051959_lung 1 .74 RPM
SRP051959_liver 1 .62 RPM
SRP051959_kidney 2 .44 RPM
SRP051959_heart 1 .28 RPM
SRP051959_colon 1 .29 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000002901 within_species_paralog 1 retrogene
retro_cjac_569,
Callithrix jacchus ENSCJAG00000011445 within_species_paralog 1 retrogene
retro_cjac_1164,
Callithrix jacchus ENSCJAG00000034702 within_species_paralog 1 retrogene
retro_cjac_610,
Homo sapiens ENSG00000163249 possible_ortholog 3 retrogenes
retro_hsap_1629, retro_hsap_1984, retro_hsap_4845,
Mus musculus ENSMUSG00000070871 possible_ortholog 1 retrogene
retro_mmus_3072,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_3555 58.06 54.27
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Download FASTA sequences of all ENSCJAG00000001008 retrocopies