Parental gene: | ENSCJAG00000011445 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 12:29398154..29413647(+) |
>ENSCJAG00000011445
TTTCTCAAACATCATATACGTCCGAGGCATCTTGGTAGAACGTACAGCTCGTGTTCCACCATATTGCTGGACAACAGCAC
AGTCAGTGAGCCTGAACTCTGCCACACATTAGAAAGTGTGACTTTGGCAATATATTACAACATAAAGCACAGAACAGTAT
ATGCAAATAGATCTCTGGCTATTTTCAATGAGTCAATACATCCACTTTCACAAGAAGAGATTCCAGGGAAATCCTTTGAG
GACGATCCCACACACAAATGCATTTTCAGTTATTTCTGTAATATTTTTGCAGTCGCAGAACTAACAGCTCCATGTGCGAT
CGTAGCATTGGTGTACATTGAACGCCTTTTAACTAAAGCTAACATCGATCTTTGTCCTACTAATTGGAAAAAAATTGTCC
TCGGAGCCATGCTTCTGGCCTCCAAGGTTTGGAGAGATCGTGGTCTGTGGAGTGTGGATGACAGCCAGAATCCCAAGGAT
GTTGCAGTTGAGACAATGAGTAAGATGGAGAAGAGTTTTTTGGAGCTACTCGAGTTTAAAATTCATGTGTCTGCCAGTGT
TTATGTGAAATATTACTTTGACCTGTGTGCCTTGCCATACGACCATGAACTGGATTTTCAGTTTAGTATTCTTCACAAAC
ATATAGCGCAGAAATTGAAGGCTATGTCACGGCTGTGTGAGTACAAAGACCTGCATCAAGATGCCGCCGCTATGACAAGG
GCCATCAGCATGGATTTCATCGGCATTAGGCATACTAATGCCATCTTATCTTAA
TTTCTCAAACATCATATACGTCCGAGGCATCTTGGTAGAACGTACAGCTCGTGTTCCACCATATTGCTGGACAACAGCAC
AGTCAGTGAGCCTGAACTCTGCCACACATTAGAAAGTGTGACTTTGGCAATATATTACAACATAAAGCACAGAACAGTAT
ATGCAAATAGATCTCTGGCTATTTTCAATGAGTCAATACATCCACTTTCACAAGAAGAGATTCCAGGGAAATCCTTTGAG
GACGATCCCACACACAAATGCATTTTCAGTTATTTCTGTAATATTTTTGCAGTCGCAGAACTAACAGCTCCATGTGCGAT
CGTAGCATTGGTGTACATTGAACGCCTTTTAACTAAAGCTAACATCGATCTTTGTCCTACTAATTGGAAAAAAATTGTCC
TCGGAGCCATGCTTCTGGCCTCCAAGGTTTGGAGAGATCGTGGTCTGTGGAGTGTGGATGACAGCCAGAATCCCAAGGAT
GTTGCAGTTGAGACAATGAGTAAGATGGAGAAGAGTTTTTTGGAGCTACTCGAGTTTAAAATTCATGTGTCTGCCAGTGT
TTATGTGAAATATTACTTTGACCTGTGTGCCTTGCCATACGACCATGAACTGGATTTTCAGTTTAGTATTCTTCACAAAC
ATATAGCGCAGAAATTGAAGGCTATGTCACGGCTGTGTGAGTACAAAGACCTGCATCAAGATGCCGCCGCTATGACAAGG
GCCATCAGCATGGATTTCATCGGCATTAGGCATACTAATGCCATCTTATCTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 0 .06 RPM |
| SRP051959_skeletal_muscle | 0 .04 RPM |
| SRP051959_lymph_node | 0 .27 RPM |
| SRP051959_lung | 0 .15 RPM |
| SRP051959_liver | 0 .00 RPM |
| SRP051959_kidney | 0 .02 RPM |
| SRP051959_heart | 0 .04 RPM |
| SRP051959_colon | 0 .02 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000001008 | within_species_paralog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000002901 | within_species_paralog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000034702 | within_species_paralog | 1 retrogene | |
| Homo sapiens | ENSG00000163249 | possible_ortholog | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000008136 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000070871 | possible_ortholog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000008072 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1164 | 76.08 | 98.83 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000011445 retrocopies