Parental gene: | HMGCS1, ENSCJAG00000001303 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 2:160043914..160067118(+) |
>ENSCJAG00000001303
ATGCCTGGGTCGCTTCCTTTGAATGCAGAAGCTTGCTGGCCAAAAGATGTGGGAATTGTTGCCCTTGAGATCTATTTTCC
TTCTCAATATGTTGATCAAGCAGAGTTGGAAAAATATGATGGTGTAGATGCTGGCAAGTATACCATTGGCTTGGGCCAGG
CCAAGATGGGCTTCTGCACAGATAGAGAAGATATCAACTCTCTTTGCATGACTGTGGTTCAGAATCTTATGGAGAGAAAT
AACCTTTCCTATGATTGCATTGGGCGGCTGGAAGTTGGAACAGAGACAATCATCGACAAATCAAAGTCAGTGAAGACTAA
TTTGATGCAGCTGTTTGAAGAGTCTGGGAATACAGATATAGAAGGAATTGATACAACTAATGCATGCTATGGAGGCACAG
CTGCTGTCTTCAATGCTGTTAACTGGATTGAGTCCAGCTCTTGGGATGGACGGTACGCCCTGGTAGTTGCGGGAGATATT
GCTGTATACGCCACAGGAAATGCTAGACCTACAGGTGGAGTTGGAGCAGTAGCTCTGCTAATTGGGCCAAATGCTCCTTT
AATTTTTGAACGAGGACTTCGTGGGACACATATGCAACATGCCTATGATTTTTACAAGCCTGATATGCTATCTGAATATC
CTATAGTGGATGGAAAGCTCTCCATACAGTGCTACCTCAGTGCACTAGACCGTTGCTATTCTGTCTACTGCAAAAAGATC
CGTGCCCAATGGCAGAAAGAGGGAAATGATAAAGATTTTACCTTGAATGATTTTGGCTTCATGATCTTTCACTCACCATA
TTGCAAGCTGGTTCAGAAATCTCTAGCTCGGATGTTGCTGAATGACTTCCTTAATGACCAAAATAGAGATAAAAACACTA
TCTATAGTGGCCTGGAAGCCTTTGGGGATGTTAAATTAGAAGACACCTACTTTGATAGAGATGTGGAGAAGGCATTTATG
AAGGCTAGTTCTGAACTCTTCAATCAGAAAACAAAGGCATCTTTGCTTGTATCAAATCAAAATGGAAATATGTACACATC
TTCAGTATATGGTTCCCTTGCATCTGTTCTAGCACAGTACTCACCTCAGCAATTAGCAGGGAAGAGAATTGGAGTGTTTT
CTTATGGTTCTGGTTTGGCTGCCACTCTCTACTCTCTTAAAGTTACACAAGATGCTACACCAGGGTCTGCTCTTGATAAA
ATAACGGCAAGTTTATGTGATCTTAAATCAAGGCTTGATTCAAGAACTTGTGTGGCACCAGATGTCTTTGCTGAAAACAT
GAAGCTCAGAGAGGACACCCATCATCTGGTCAACTATATTCCCCAGGGTTCAATAGATTCACTCTTTGAAGGAACGTGGT
ACTTAGTTAGGGTGGATGAAAAGCACAGAAGAACTTACGCTCGGCGTCCCACTCCAAATGACGACACTTTGGATGAAGGA
GTAGGACTTGTGCATTCAAACACAGCAACTGAGCATATTCCAAGCCCTGCCAAGAAAGTGCCAAGACTCCCTGCCACAGC
AGCAGAACCTGAAGCAGCTGTCATTAGTAATGGGGAACATTAA
ATGCCTGGGTCGCTTCCTTTGAATGCAGAAGCTTGCTGGCCAAAAGATGTGGGAATTGTTGCCCTTGAGATCTATTTTCC
TTCTCAATATGTTGATCAAGCAGAGTTGGAAAAATATGATGGTGTAGATGCTGGCAAGTATACCATTGGCTTGGGCCAGG
CCAAGATGGGCTTCTGCACAGATAGAGAAGATATCAACTCTCTTTGCATGACTGTGGTTCAGAATCTTATGGAGAGAAAT
AACCTTTCCTATGATTGCATTGGGCGGCTGGAAGTTGGAACAGAGACAATCATCGACAAATCAAAGTCAGTGAAGACTAA
TTTGATGCAGCTGTTTGAAGAGTCTGGGAATACAGATATAGAAGGAATTGATACAACTAATGCATGCTATGGAGGCACAG
CTGCTGTCTTCAATGCTGTTAACTGGATTGAGTCCAGCTCTTGGGATGGACGGTACGCCCTGGTAGTTGCGGGAGATATT
GCTGTATACGCCACAGGAAATGCTAGACCTACAGGTGGAGTTGGAGCAGTAGCTCTGCTAATTGGGCCAAATGCTCCTTT
AATTTTTGAACGAGGACTTCGTGGGACACATATGCAACATGCCTATGATTTTTACAAGCCTGATATGCTATCTGAATATC
CTATAGTGGATGGAAAGCTCTCCATACAGTGCTACCTCAGTGCACTAGACCGTTGCTATTCTGTCTACTGCAAAAAGATC
CGTGCCCAATGGCAGAAAGAGGGAAATGATAAAGATTTTACCTTGAATGATTTTGGCTTCATGATCTTTCACTCACCATA
TTGCAAGCTGGTTCAGAAATCTCTAGCTCGGATGTTGCTGAATGACTTCCTTAATGACCAAAATAGAGATAAAAACACTA
TCTATAGTGGCCTGGAAGCCTTTGGGGATGTTAAATTAGAAGACACCTACTTTGATAGAGATGTGGAGAAGGCATTTATG
AAGGCTAGTTCTGAACTCTTCAATCAGAAAACAAAGGCATCTTTGCTTGTATCAAATCAAAATGGAAATATGTACACATC
TTCAGTATATGGTTCCCTTGCATCTGTTCTAGCACAGTACTCACCTCAGCAATTAGCAGGGAAGAGAATTGGAGTGTTTT
CTTATGGTTCTGGTTTGGCTGCCACTCTCTACTCTCTTAAAGTTACACAAGATGCTACACCAGGGTCTGCTCTTGATAAA
ATAACGGCAAGTTTATGTGATCTTAAATCAAGGCTTGATTCAAGAACTTGTGTGGCACCAGATGTCTTTGCTGAAAACAT
GAAGCTCAGAGAGGACACCCATCATCTGGTCAACTATATTCCCCAGGGTTCAATAGATTCACTCTTTGAAGGAACGTGGT
ACTTAGTTAGGGTGGATGAAAAGCACAGAAGAACTTACGCTCGGCGTCCCACTCCAAATGACGACACTTTGGATGAAGGA
GTAGGACTTGTGCATTCAAACACAGCAACTGAGCATATTCCAAGCCCTGCCAAGAAAGTGCCAAGACTCCCTGCCACAGC
AGCAGAACCTGAAGCAGCTGTCATTAGTAATGGGGAACATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 5 .92 RPM |
| SRP051959_skeletal_muscle | 5 .35 RPM |
| SRP051959_lymph_node | 8 .74 RPM |
| SRP051959_lung | 7 .19 RPM |
| SRP051959_liver | 244 .68 RPM |
| SRP051959_kidney | 9 .90 RPM |
| SRP051959_heart | 7 .68 RPM |
| SRP051959_colon | 47 .46 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Echinops telfairi | ENSETEG00000003583 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000112972 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000015439 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000016845 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1754 | 70.04 | 52.50 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000001303 retrocopies