Parental gene: | CCNC, ENSCJAG00000001388 |
| Aliases: | None |
| Description: | cyclin C [Source:HGNC Symbol;Acc:1581] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 4:98726072..98755932(-) |
>ENSCJAG00000001388
ATGGCAGGGAACTTTTGGCAGAGCTCCCACTATTTGCAATGGATTTTGGATAAACAAGATCTGTTGAAGGAGCGCCAAAA
GGATTTAAAGTTTCTCTCGGAAGAAGAATATTGGAAGTTACAAATATTTTTTACAAATGTTATCCAGGCATTAGGTGAAC
ATCTTAAATTAAGACAACAAGTTATTGCCACTGCTACAGTATATTTCAAGAGATTCTATGCCAGGTATTCTCTGAAAAGT
ATAGATCCTGTATTAATGGCTCCTACATGTGTGTTTTTGGCATCCAAAGTAGAGGAATTTGGAGTAGTTTCAAATACAAG
ATTGACTGCTGCTGCTACTTCTGTATTAAAAACTAGATTTTCATATGCCTTTCCAAAGGAATTTCCTTATAGGATGAATC
ATATATTAGAATGTGAATTCTATCTGTTAGAACTAATGGATTGTTGCTTGATAGTGTATCATCCTTATAGACCTTTGCTC
CAGTATGTGCAGGACATGGGCCAAGAAGACATGTTGCTTCCCCTTGCATGGAGGATAGTGAATGATACCTACAGAACGGA
TCTTTGCCTACTGTATCCTCCTTTCATGATAGCTTTAGCTTGCCTACATGTAGCCTGTGTTGTACAGCAGAAAGATGCCA
GGCAATGGTTTGCTGAGCTTTCTGTGGATATGGAGAAGATTTTGGAAATAATCAGGGTTATTTTAAAACTATATGAGCAG
TGGAAGAATTTCGATGAAAGAAAAGAGATGGCAACTATACTTAGTAAGATGCCAAAACCAAAACCACCTCCAAACAGTGA
AGGAGAGCAGGGTCCAAATGGAAGTCAGAACTCTAGCTACAGCCAATCTTAA
ATGGCAGGGAACTTTTGGCAGAGCTCCCACTATTTGCAATGGATTTTGGATAAACAAGATCTGTTGAAGGAGCGCCAAAA
GGATTTAAAGTTTCTCTCGGAAGAAGAATATTGGAAGTTACAAATATTTTTTACAAATGTTATCCAGGCATTAGGTGAAC
ATCTTAAATTAAGACAACAAGTTATTGCCACTGCTACAGTATATTTCAAGAGATTCTATGCCAGGTATTCTCTGAAAAGT
ATAGATCCTGTATTAATGGCTCCTACATGTGTGTTTTTGGCATCCAAAGTAGAGGAATTTGGAGTAGTTTCAAATACAAG
ATTGACTGCTGCTGCTACTTCTGTATTAAAAACTAGATTTTCATATGCCTTTCCAAAGGAATTTCCTTATAGGATGAATC
ATATATTAGAATGTGAATTCTATCTGTTAGAACTAATGGATTGTTGCTTGATAGTGTATCATCCTTATAGACCTTTGCTC
CAGTATGTGCAGGACATGGGCCAAGAAGACATGTTGCTTCCCCTTGCATGGAGGATAGTGAATGATACCTACAGAACGGA
TCTTTGCCTACTGTATCCTCCTTTCATGATAGCTTTAGCTTGCCTACATGTAGCCTGTGTTGTACAGCAGAAAGATGCCA
GGCAATGGTTTGCTGAGCTTTCTGTGGATATGGAGAAGATTTTGGAAATAATCAGGGTTATTTTAAAACTATATGAGCAG
TGGAAGAATTTCGATGAAAGAAAAGAGATGGCAACTATACTTAGTAAGATGCCAAAACCAAAACCACCTCCAAACAGTGA
AGGAGAGCAGGGTCCAAATGGAAGTCAGAACTCTAGCTACAGCCAATCTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 22 .63 RPM |
| SRP051959_skeletal_muscle | 10 .70 RPM |
| SRP051959_lymph_node | 21 .39 RPM |
| SRP051959_lung | 19 .29 RPM |
| SRP051959_liver | 24 .61 RPM |
| SRP051959_kidney | 23 .83 RPM |
| SRP051959_heart | 16 .10 RPM |
| SRP051959_colon | 18 .55 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000015744 | ortholog_one2one | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000006738 | other_paralog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000011407 | within_species_paralog | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000011999 | possible_ortholog | 3 retrogenes | |
| Echinops telfairi | ENSETEG00000002643 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000001116 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000004726 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_780 | 85.26 | 87.99 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000001388 retrocopies