Parental gene: | MA_R322_JSMB1F6EF, ENSCJAG00000006738 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 10:125314024..125356931(+) |
>ENSCJAG00000006738
ATGAAGGAGAATAAAGAAAATTCAAGCCCTTCAGTAACTTCAGCAAACCTGGACCACACAAAACCATGTTGGTACTGGGA
TAAGAAAGACTTGGCTCATACACCCTCACAGCTTGAAGGACTTGACCCAGCCACTGAGGCCCGGTACCGCCGAGAGGGCG
CTCGGTTCATCTTTGATGTGGGCACACGTTTGGGGCTACACTATGATACCCTGGCAACTGGAATAATTTATTTTCATCGC
TTCTATATGTTTCATTCTTTCAAGCAATTCCCAAGATATGTGACAGGAGCCTGTTGCCTCTTTCTGGCTGGGAAAGTAGA
AGAAACACCAAAAAAATGTAAAGATATCATCAAAACAGCTCGTAGTTTATTAAATGATGTACAGTTTGGCCAGTTTGGAG
ATGACCCAAAGGAGGAAGTAATGGTTCTGGAGAGAATCTTACTGCAGACCATCAAGTTTGACCTACAGGTGGAACATCCG
TACCAGTTCCTACTCAAATATGCAAAGCAACTCAAAGGTGATAAAAACAAAATTCAAAAGTTGGTTCAAATGGCATGGAC
ATTTGTAAATGACAGTCTCTGCACCACCTTGTCACTGCAGTGGGAACCAGAGATCATAGCGGTAGCAGTGATGTATCTCG
CAGGACGTTTGTGCAAATTCGAAATACAAGAATGGACCTCGAAACCCATGTATAGGAGATGGTGGGAGCAGTTTGTTCAA
GATGTCCCAGTCGACGTTTTGGAAGACATATGCCACCAAATCCTGGACCTTTACTCACAAGGAAAACAACAGATGCCTCA
TCACACCCCCCATCAGCTGCAACAGCCCCCATCTCTTCAGCCTACACCACAAGTGCCGCAAGTACAACAGTCACAACCGT
CTCAAGGCTCCGAACCATCCCAGCCCCAGCAGAAGGACCCCCACACCCTCCTCCAGGCTTGGGCCTGCCACCAGCCAGCT
ACCCACCTCCTGCTGTGCCCCCTGGAGGACAGCCCCCTGTGCCCCCGCCCATTCCCCCACCGGGCATGCCTCCAGTTGGG
GGGCTGGGGCGGGCAGCCTGGA
ATGAAGGAGAATAAAGAAAATTCAAGCCCTTCAGTAACTTCAGCAAACCTGGACCACACAAAACCATGTTGGTACTGGGA
TAAGAAAGACTTGGCTCATACACCCTCACAGCTTGAAGGACTTGACCCAGCCACTGAGGCCCGGTACCGCCGAGAGGGCG
CTCGGTTCATCTTTGATGTGGGCACACGTTTGGGGCTACACTATGATACCCTGGCAACTGGAATAATTTATTTTCATCGC
TTCTATATGTTTCATTCTTTCAAGCAATTCCCAAGATATGTGACAGGAGCCTGTTGCCTCTTTCTGGCTGGGAAAGTAGA
AGAAACACCAAAAAAATGTAAAGATATCATCAAAACAGCTCGTAGTTTATTAAATGATGTACAGTTTGGCCAGTTTGGAG
ATGACCCAAAGGAGGAAGTAATGGTTCTGGAGAGAATCTTACTGCAGACCATCAAGTTTGACCTACAGGTGGAACATCCG
TACCAGTTCCTACTCAAATATGCAAAGCAACTCAAAGGTGATAAAAACAAAATTCAAAAGTTGGTTCAAATGGCATGGAC
ATTTGTAAATGACAGTCTCTGCACCACCTTGTCACTGCAGTGGGAACCAGAGATCATAGCGGTAGCAGTGATGTATCTCG
CAGGACGTTTGTGCAAATTCGAAATACAAGAATGGACCTCGAAACCCATGTATAGGAGATGGTGGGAGCAGTTTGTTCAA
GATGTCCCAGTCGACGTTTTGGAAGACATATGCCACCAAATCCTGGACCTTTACTCACAAGGAAAACAACAGATGCCTCA
TCACACCCCCCATCAGCTGCAACAGCCCCCATCTCTTCAGCCTACACCACAAGTGCCGCAAGTACAACAGTCACAACCGT
CTCAAGGCTCCGAACCATCCCAGCCCCAGCAGAAGGACCCCCACACCCTCCTCCAGGCTTGGGCCTGCCACCAGCCAGCT
ACCCACCTCCTGCTGTGCCCCCTGGAGGACAGCCCCCTGTGCCCCCGCCCATTCCCCCACCGGGCATGCCTCCAGTTGGG
GGGCTGGGGCGGGCAGCCTGGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 6 .87 RPM |
| SRP051959_skeletal_muscle | 5 .55 RPM |
| SRP051959_lymph_node | 6 .89 RPM |
| SRP051959_lung | 6 .39 RPM |
| SRP051959_liver | 4 .92 RPM |
| SRP051959_kidney | 6 .86 RPM |
| SRP051959_heart | 6 .58 RPM |
| SRP051959_colon | 8 .10 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000001388 | other_paralog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000011407 | other_paralog | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000012493 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1273 | 86.05 | 60.91 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000006738 retrocopies