Parental gene: | ENSCJAG00000011407 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | X:140115333..140137493(-) |
>ENSCJAG00000011407
ATGGAAGGCCCGGAGGGCGGCGGACGGGGACCCGTAGCGCGGGGCCCCGAGGGACGGCCGGCGCCCGAAGCCAGAGTGCA
CTTCCGAGTGGCGAGGTTCATCATGGAGGCAGGTGTCAAGCTGGGGATGCGGTCCATTCCCATTGCCACTGCTTGCACCA
TTTACCATAAGTTCTTCTGTGAGAGCAGCCTGGATGCCTATGACCCTTACTTGGTCGCCATGTCTTCCATTTACCTGGCT
GGCAAAGTGGAAGAGCAGCATCTGCGGACCCGTGATATCATCAATGTGTCCAACAGGTACCTTGACCCAAGCGGTGAGCC
CCTGGAGTTGGACTCCCGCTTCTGGGAGCTCCGAGACAGCATTGTGCAGTGCGAGCTTCTCGTGCTGAGAGTTCTGCGCT
TCCAGGTCTCCTTCCAGCATCCACACAAGTACCTGCTCCACTACCTGGTTTCCTTCAAGAACTGGCTGAACCGCCACAGC
TGGCAGCGGACTCCTGTTGCCGTCACTGCCTGGGCCCTGCTTCGGGACAGCTACCACGGGGGGCTGTGCCTCCGCTTCCA
GGCCCAGCACATAGCCGTGGCAGTGCTCTACCTGGCCCTGCAGGTCTATGGAGTCGAGGTACCTGCTGAGGTCGAGGCTG
AGAAGCCATGGTGGCAGGTATTTAGTGACGACCTTACCAAGCCAATCATTGATAATATTGTGTCTGATCTCATTCAGATT
TATGCCATGGACACAGAGATCCCCTAA
ATGGAAGGCCCGGAGGGCGGCGGACGGGGACCCGTAGCGCGGGGCCCCGAGGGACGGCCGGCGCCCGAAGCCAGAGTGCA
CTTCCGAGTGGCGAGGTTCATCATGGAGGCAGGTGTCAAGCTGGGGATGCGGTCCATTCCCATTGCCACTGCTTGCACCA
TTTACCATAAGTTCTTCTGTGAGAGCAGCCTGGATGCCTATGACCCTTACTTGGTCGCCATGTCTTCCATTTACCTGGCT
GGCAAAGTGGAAGAGCAGCATCTGCGGACCCGTGATATCATCAATGTGTCCAACAGGTACCTTGACCCAAGCGGTGAGCC
CCTGGAGTTGGACTCCCGCTTCTGGGAGCTCCGAGACAGCATTGTGCAGTGCGAGCTTCTCGTGCTGAGAGTTCTGCGCT
TCCAGGTCTCCTTCCAGCATCCACACAAGTACCTGCTCCACTACCTGGTTTCCTTCAAGAACTGGCTGAACCGCCACAGC
TGGCAGCGGACTCCTGTTGCCGTCACTGCCTGGGCCCTGCTTCGGGACAGCTACCACGGGGGGCTGTGCCTCCGCTTCCA
GGCCCAGCACATAGCCGTGGCAGTGCTCTACCTGGCCCTGCAGGTCTATGGAGTCGAGGTACCTGCTGAGGTCGAGGCTG
AGAAGCCATGGTGGCAGGTATTTAGTGACGACCTTACCAAGCCAATCATTGATAATATTGTGTCTGATCTCATTCAGATT
TATGCCATGGACACAGAGATCCCCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 2 .56 RPM |
| SRP051959_skeletal_muscle | 1 .48 RPM |
| SRP051959_lymph_node | 2 .97 RPM |
| SRP051959_lung | 2 .75 RPM |
| SRP051959_liver | 2 .47 RPM |
| SRP051959_kidney | 2 .46 RPM |
| SRP051959_heart | 2 .39 RPM |
| SRP051959_colon | 2 .40 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000001388 | within_species_paralog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000006738 | other_paralog | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000012846 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000027073 | ortholog_one2many | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000011480 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000013298 | ortholog_one2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000033279 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1814 | 89.32 | 94.35 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000011407 retrocopies