Parental gene: | CCND2, ENSCJAG00000001593 |
| Aliases: | None |
| Description: | cyclin D2 [Source:HGNC Symbol;Acc:1583] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 9:15919213..15946958(+) |
>ENSCJAG00000001593
ATGGAGCTACTGTGCTGCGAGGTGGACCCGATCCGCAGGGCCGTGCGGGACCGCAACCTGCTACAGGACGACCGCGTCCT
GCAGAACCTGCTCACCATCGAGGAGCGCTACCTTCCGCAATGCTCCTACTTCAAGTGCGTGCAAAAAGACATCCAGCCCT
ACATGCGCAGGATGGTGGCCACCTGGATGCTGGAGGTCTGTGAGGAACAGAAGTGCGAAGAAGAGGTCTTCCCTCTGGCC
ATGAATTACCTGGACCGTTTCTTGGCTGGGGTCCCGACTCCAAAGTCCCATCTGCAACTCCTGGGTGCTGTCTGCATGTT
CCTGGCCTCCAAGCTCAAAGAGACCAGCCCGCTGACTGCGGAGAAGCTGTGCATTTACACTGACAACTCCATCAAGCCTC
AGGAGCTGCTGGAGTGGGAGCTGGTGGTGCTGGGAAAGTTGAAGTGGAACCTGGCAGCTGTCACTCCTCACGACTTCATT
GAGCACATCTTGCGCAAGCTGCCTCAGCAGCGTGAGAAGCTGTCTCTGATCCGAAAGCACGCCCAGACCTTCATCGCTCT
GTGTGCCACCGACTTTAAGTTCGCCATGTACCCGCCATCGATGATCGCAACTGGAAGTGTGGGAGCAGCCATCTGTGGCC
TCCAGCAGGATGAGGAAGTGAGCTCGCTCACTTGCGATGCCCTGACTGAGCTGCTGGCTAAGATCACCAACACAGACGTG
GATTGTCTCAAAGCCTGCCAGGAGCAGATTGAGGCAGTGCTCCTCAATAGCCTGCAGCAGTACCGTCAGGACCAGCGCGA
CGGATCCAAGTCGGAAGATGAACTGGACCAAGCCAGCACCCCTACAGACGTCCGGGATATCGACCTGTGA
ATGGAGCTACTGTGCTGCGAGGTGGACCCGATCCGCAGGGCCGTGCGGGACCGCAACCTGCTACAGGACGACCGCGTCCT
GCAGAACCTGCTCACCATCGAGGAGCGCTACCTTCCGCAATGCTCCTACTTCAAGTGCGTGCAAAAAGACATCCAGCCCT
ACATGCGCAGGATGGTGGCCACCTGGATGCTGGAGGTCTGTGAGGAACAGAAGTGCGAAGAAGAGGTCTTCCCTCTGGCC
ATGAATTACCTGGACCGTTTCTTGGCTGGGGTCCCGACTCCAAAGTCCCATCTGCAACTCCTGGGTGCTGTCTGCATGTT
CCTGGCCTCCAAGCTCAAAGAGACCAGCCCGCTGACTGCGGAGAAGCTGTGCATTTACACTGACAACTCCATCAAGCCTC
AGGAGCTGCTGGAGTGGGAGCTGGTGGTGCTGGGAAAGTTGAAGTGGAACCTGGCAGCTGTCACTCCTCACGACTTCATT
GAGCACATCTTGCGCAAGCTGCCTCAGCAGCGTGAGAAGCTGTCTCTGATCCGAAAGCACGCCCAGACCTTCATCGCTCT
GTGTGCCACCGACTTTAAGTTCGCCATGTACCCGCCATCGATGATCGCAACTGGAAGTGTGGGAGCAGCCATCTGTGGCC
TCCAGCAGGATGAGGAAGTGAGCTCGCTCACTTGCGATGCCCTGACTGAGCTGCTGGCTAAGATCACCAACACAGACGTG
GATTGTCTCAAAGCCTGCCAGGAGCAGATTGAGGCAGTGCTCCTCAATAGCCTGCAGCAGTACCGTCAGGACCAGCGCGA
CGGATCCAAGTCGGAAGATGAACTGGACCAAGCCAGCACCCCTACAGACGTCCGGGATATCGACCTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 17 .48 RPM |
| SRP051959_skeletal_muscle | 1 .42 RPM |
| SRP051959_lymph_node | 40 .59 RPM |
| SRP051959_lung | 20 .95 RPM |
| SRP051959_liver | 3 .21 RPM |
| SRP051959_kidney | 4 .59 RPM |
| SRP051959_heart | 15 .22 RPM |
| SRP051959_colon | 46 .35 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000001857 | within_species_paralog | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000016075 | other_paralog | 1 retrogene | |
| Felis catus | ENSFCAG00000000138 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000015589 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000005208 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3884 | 62.26 | 91.35 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000001593 retrocopies