Parental gene:

SERF2, ENSCJAG00000002541

Aliases:C10H15orf63, HYPK
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:10:20869089..20877992(+)


>ENSCJAG00000002541
ATGACGGGCTTTCTGCTGCCGCCCGCAAGCAGAGCTTCTAGAATTGGAGCAGAAAGAAGGTGTGGCCCAGGGCCAGCCCC
GCCTCCTCCCCGGGCGGAAGTTGTCAGTTGCGGAAGTCGCCGTGGGGTGGGGCTTATGCAGCGGCGTGGTGAAATAGATA
TGGCGACCGAGGGGGATGTGGAGCTAGAGTTAGAGACCGAGACCAGTGGCCCAGAGCGACCTCCCGAGAAGCCACGGAAA
CATGACAGCGGCGCGGCGGACTTGGAGCGGGTCACCGACTATGCAGAGGAGAAGGAGATCCAGAGTTCCAATCTGGAGAC
GGCCATGTCTGTGATTGGAGACAGAAGGTCCCGGGAGCAGAAAGCCAAACAGGAGCGGGAGAAAGAACTGGCAAAAGTCA
CTATCAAGAAGGAAGATCTGGAACTGATAATGACCGAGATGGAGATATCTCGAGCAGCAGCAGAACGCAGCTTGCGGGAA
CACATGGGCAATGTGGTAGAGGCGCTTATTGCCCTAACCAACTGA

Library Parental gene expression (RPM)
SRP051959_spleen 22 .33 RPM
SRP051959_skeletal_muscle 24 .33 RPM
SRP051959_lymph_node 17 .69 RPM
SRP051959_lung 20 .53 RPM
SRP051959_liver 22 .77 RPM
SRP051959_kidney 20 .72 RPM
SRP051959_heart 20 .21 RPM
SRP051959_colon 21 .34 RPM



Species Parental gene accession Homology type Retrogenes number
Echinops telfairi ENSETEG00000007464 ortholog_one2one 3 retrogenes
retro_etel_1504, retro_etel_1616, retro_etel_1830,
Gorilla gorilla ENSGGOG00000014809 ortholog_one2one 1 retrogene
retro_ggor_2557,
Macropus eugenii ENSMEUG00000013059 ortholog_one2one 1 retrogene
retro_meug_1583,
Monodelphis domestica ENSMODG00000017744 ortholog_one2many 2 retrogenes
retro_mdom_26, retro_mdom_306,
Nomascus leucogenys ENSNLEG00000005454 ortholog_one2one 1 retrogene
retro_nleu_2150,
Oryctolagus cuniculus ENSOCUG00000001161 ortholog_one2one 2 retrogenes
retro_ocun_1395, retro_ocun_967,
Otolemur garnettii ENSOGAG00000010201 ortholog_one2one 1 retrogene
retro_ogar_1064,
Pongo abelii ENSPPYG00000006424 ortholog_one2one 1 retrogene
retro_pabe_3108,
Pan troglodytes ENSPTRG00000038721 ortholog_one2one 1 retrogene
retro_ptro_2582,
Rattus norvegicus ENSRNOG00000015703 ortholog_one2one 1 retrogene
retro_rnor_2477,
Ictidomys tridecemlineatus ENSSTOG00000006916 ortholog_one2one 2 retrogenes
retro_itri_1861, retro_itri_1864,
Tursiops truncatus ENSTTRG00000003726 ortholog_one2one 1 retrogene
retro_ttru_1499,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_748 89.01 52.30
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2. retro_cjac_1352 81.42 63.79
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Download FASTA sequences of all ENSCJAG00000002541 retrocopies