Parental gene:

ENSCJAG00000003568

Aliases:None
Description:SH3 domain-binding glutamic acid-rich-like protein [Source:UniProtKB/TrEMBL;Acc:F7GVV1]
Organism:Marmoset (Callithrix jacchus)
Coordinates:X:71957681..72066764(+)


>ENSCJAG00000003568
ATGGTGATCCGTGTATATATCGCATCTTCCTCTGGCTCTACGGCGATTAAGAAGAAACAGCAGGATGTGCTTGGTTTCCT
AGAAGCCAACAAAATAGGATTTGAAGAAAAAGATATTGCAGCCAATGAAGAGAATCGGAAGTGGATGAGAGAAAATGTAC
CTGAAAATAGTCGACCAGCCACAGGGTACCCCCTGCCACCTCAGATTTTCAATGAAAGCCAGTATCGAGGGGACTATGAT
GCTTTCTTTGAAGCCAGAGAAAATAATGCAGTGTATGCCTTCTTAGGCCTGACAGCCCCTCCTGGTTCAAAGGAAGCAGA
AGTGCAAGCAAAGCAGCAAGCATGA

Library Parental gene expression (RPM)
SRP051959_spleen 6 .89 RPM
SRP051959_skeletal_muscle 0 .63 RPM
SRP051959_lymph_node 3 .31 RPM
SRP051959_lung 5 .34 RPM
SRP051959_liver 1 .58 RPM
SRP051959_kidney 3 .19 RPM
SRP051959_heart 5 .95 RPM
SRP051959_colon 4 .37 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000004130 possible_ortholog 1 retrogene
retro_chof_647,
Cavia porcellus ENSCPOG00000012267 ortholog_one2many 3 retrogenes
retro_cpor_1172, retro_cpor_244, retro_cpor_844,
Dipodomys ordii ENSDORG00000011106 possible_ortholog 2 retrogenes
retro_dord_199, retro_dord_588,
Equus caballus ENSECAG00000012612 ortholog_one2many 1 retrogene
retro_ecab_648,
Ictidomys tridecemlineatus ENSSTOG00000013216 ortholog_one2many 1 retrogene
retro_itri_1152,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_140 98.25 100.00
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2. retro_cjac_1102 82.46 100.00
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Download FASTA sequences of all ENSCJAG00000003568 retrocopies