Parental gene: | TUBB6, ENSCJAG00000004826 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 13:43431418..43449333(+) |
>ENSCJAG00000004826
ATGAGGGAGATCGTGCACATCCAGGCGGGCCAGTGCGGGAACCAGATCGGCACCAAGTTTTGGGAAGTGATCAGTGATGA
GCACGGCATCGACCCTGCCGGAGGCTACGTGGGAGACTCGGCGCTGCAACTGGAGAGAATCAACGTCTACTACAATGAGT
CATCGTCTCAGAAATATGTGCCCAGGGCCGCCCTGGTGGACTTAGAGCCAGGCACCATGGACAGCGTGCGCTCTGGGCCT
TTCGGGCAGCTTTTCCGGCCTGACAACTTCATCTTTGGCCAGACGGGCGCAGGGAACAACTGGGCGAAGGGGCACTACAC
GGAGGGCGCGGAGCTGGTGGACGCGGTGCTGGATGTGGTGCGGAAAGAGTGCGAGCACTGCGACTGCCTGCAGGGCTTCC
AGCTCACGCACTCGCTGGGCGGCGGCACGGGCTCGGGCATGGGCACGCTGCTCATCAGCAAGATTCGCGAGGAGTTCCCA
GACCGCATCATGAACACCTTCAGCGTCATGCCCTCGCCCAAGGTGTCGGACACGGTGGTGGAGCCCTACAATGCCACGCT
GTCGGTGCACCAGCTGGTGGAGAATACCGATGAGACCTACTGCATCGATAACGAGGCGCTCTATGACATCTGCTTCCGCA
CCCTCAAGCTGACCACGCCCACCTACGGGGACCTCAACCATCTAGTGTCAGCCACCATGAGCGGGGTCACCACCTCGCTG
CGCTTCCCAGGCCAGCTCAACGCCGACCTGCGCAAGCTGGCAGTGAACATGGTGCCCTTCCCACGCCTGCACTTCTTCAT
GCCCGGCTTCGCGCCACTTACCAGCCGCGGCAGCCAGCAGTACCGGGCCCTGACCGTGCCCGAGCTCACCCAGCAGATGT
TCGACGCCAGGAACATGATGGCCGCCTGCGACCCCCGCCATGGCCGCTACCTGACCGTGGCCACCGTGTTCCGCGGCCCC
ATGTCCATGAAGGAGGTGGACGAGCAGATGCTGGCCATCCAGAGTAAGAACAGCAGCTACTTCGTGGAGTGGATCCCCAA
CAACGTGAAGGTGGCCGTGTGCGACATCCCGCCTCGCGGCCTGAAGATGGCCTCAACGTTCATCGGCAACAGCACAGCTA
TCCAGGAGCTGTTCAAGCGCATCTCCGAGCAATTCTCAGCCATGTTCCGGCGCAAGGCCTTCCTGCACTGGTTCACGGGC
GAGGGCATGGACGAGATGGAGTTCACCGAGGCCGAGAGCAACATGAACGACCTGGTGTCCGAGTACCAGCAGTACCAGGA
TGCCACCATCAACGATGGGGAGGAAGCTTTTGAGGATGAAGAAGAGGAGATGGATGGGCAAGCCCCCAAT
ATGAGGGAGATCGTGCACATCCAGGCGGGCCAGTGCGGGAACCAGATCGGCACCAAGTTTTGGGAAGTGATCAGTGATGA
GCACGGCATCGACCCTGCCGGAGGCTACGTGGGAGACTCGGCGCTGCAACTGGAGAGAATCAACGTCTACTACAATGAGT
CATCGTCTCAGAAATATGTGCCCAGGGCCGCCCTGGTGGACTTAGAGCCAGGCACCATGGACAGCGTGCGCTCTGGGCCT
TTCGGGCAGCTTTTCCGGCCTGACAACTTCATCTTTGGCCAGACGGGCGCAGGGAACAACTGGGCGAAGGGGCACTACAC
GGAGGGCGCGGAGCTGGTGGACGCGGTGCTGGATGTGGTGCGGAAAGAGTGCGAGCACTGCGACTGCCTGCAGGGCTTCC
AGCTCACGCACTCGCTGGGCGGCGGCACGGGCTCGGGCATGGGCACGCTGCTCATCAGCAAGATTCGCGAGGAGTTCCCA
GACCGCATCATGAACACCTTCAGCGTCATGCCCTCGCCCAAGGTGTCGGACACGGTGGTGGAGCCCTACAATGCCACGCT
GTCGGTGCACCAGCTGGTGGAGAATACCGATGAGACCTACTGCATCGATAACGAGGCGCTCTATGACATCTGCTTCCGCA
CCCTCAAGCTGACCACGCCCACCTACGGGGACCTCAACCATCTAGTGTCAGCCACCATGAGCGGGGTCACCACCTCGCTG
CGCTTCCCAGGCCAGCTCAACGCCGACCTGCGCAAGCTGGCAGTGAACATGGTGCCCTTCCCACGCCTGCACTTCTTCAT
GCCCGGCTTCGCGCCACTTACCAGCCGCGGCAGCCAGCAGTACCGGGCCCTGACCGTGCCCGAGCTCACCCAGCAGATGT
TCGACGCCAGGAACATGATGGCCGCCTGCGACCCCCGCCATGGCCGCTACCTGACCGTGGCCACCGTGTTCCGCGGCCCC
ATGTCCATGAAGGAGGTGGACGAGCAGATGCTGGCCATCCAGAGTAAGAACAGCAGCTACTTCGTGGAGTGGATCCCCAA
CAACGTGAAGGTGGCCGTGTGCGACATCCCGCCTCGCGGCCTGAAGATGGCCTCAACGTTCATCGGCAACAGCACAGCTA
TCCAGGAGCTGTTCAAGCGCATCTCCGAGCAATTCTCAGCCATGTTCCGGCGCAAGGCCTTCCTGCACTGGTTCACGGGC
GAGGGCATGGACGAGATGGAGTTCACCGAGGCCGAGAGCAACATGAACGACCTGGTGTCCGAGTACCAGCAGTACCAGGA
TGCCACCATCAACGATGGGGAGGAAGCTTTTGAGGATGAAGAAGAGGAGATGGATGGGCAAGCCCCCAAT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 2 .04 RPM |
| SRP051959_skeletal_muscle | 3 .82 RPM |
| SRP051959_lymph_node | 2 .63 RPM |
| SRP051959_lung | 14 .38 RPM |
| SRP051959_liver | 19 .13 RPM |
| SRP051959_kidney | 2 .20 RPM |
| SRP051959_heart | 10 .96 RPM |
| SRP051959_colon | 9 .52 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000010101 | other_paralog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000010530 | within_species_paralog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000011697 | other_paralog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000017637 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1632 | 89.56 | 99.78 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_2667 | 86.05 | 83.33 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000004826 retrocopies