Parental gene:

ENSCJAG00000010101

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:13:117876685..117878915(+)


>ENSCJAG00000010101
ATGAGGGAGATTGTGCTCACCCAAACTGGACAGTGCGGGAACCAGATAGGTGCAAAGTTCTGGGAGGTGATCTCTGATGA
ACATGGCATTGACCCTGTTGGCACCTACCACGGGGACAGTGACCTGCAGCTGGAACGCATCAATGTGTACTACAACGAAG
CTAGCGGTGGCAGGTATGTGGCCCGCGCTGTGCTCGTGGATCTGGAGCCAGGCACCATGGACTCTGTGCGCTCAGGGCCC
TTCGGGCAGATCTTCAGGCCAGACAACTTCATTTTTGGTCAGTGTGGGGCCGGGAACAACTGGGCCAAGGGGTACTACAC
GGAAGGCGCGGAGCTGATGGAGTCGGTGATGGATGTTGTGAGGAAAGAAGCTGAGAGCTGTGATTGCCTGCAGGGTTTCC
AGCTGACCCACTCCCTGGGTGGGGGGACTGGGTCTGGGATGGGTACTCTTCTCATGGGCAAAATTCGAGAGGAGTACCCA
GACAGGATTATAAACACATTCAGCATCCTGCCCTCACCCAAGGTGTCAGACACCGTGGTGGAGCCCTACAATGCCACCCT
CTCCATCCACCAGCTAATAGAAAATGCAGACGAGACGTTCTGCATCGATAATGAAGCGCTCTATAACATCTGTTCCAGGA
CCTTAAAACTGACCACACCCACCTACGGTGACCTGAATCACCTGGTGTCTGCTACCATGAGTGGGGTCACCACGTGCCTG
CGCTTCCCGGGCCAGCTGAATGCGGACCTGCGGAAGCTGGCAGTGAACATGGTTCCATTTCCCCGACTGCACTTCTTCAT
GCCCGGCTTTGCCCCGCTGACCAGTCGGGGCAGCCAGCAATACCGGGCCCTGACCGTGGCTGAGCTCACTCAGCAACTCT
TCGATGCTAAGAATATGATGGCCGCCTGTGACCCCCGTCATGGCCGCTACCTAACCGTGGCGACCATTTTCAGAGGTCGC
ATGTCCATGAGGGAGGTGGATGAGCAAATGTTCAACATTCAGAACAAGAACAGCAGCTACTTTGCTGAATGGCTCCCTCA
CAACGTGAAAACAGCCGTCTGTGACATCCCACCCCGGGGGCTAAAAATGTCAGCCACCTTCATTGGTAACAACACGGCGA
TCCAAGAGCTCTTCAAACGCGTCTCCGAACGGTTTACAGCTATGTTCAGGCGCAAGGCCTTCCTGCACTGGTACACGGGC
GAGGGCATGGATGAGATGGAGTTCACCGAGGCCGAGAGCAACGTTAATGACCTGGTGTCAGAATACCAGCAATACCAAGA
CGCCACAGCTGAGGAGGAGGAGTTTGAGGAGTGTGCTGAGGAGGAGGTAGCCTAG

Library Parental gene expression (RPM)
SRP051959_colon 0 .00 RPM
SRP051959_heart 0 .00 RPM
SRP051959_kidney 0 .02 RPM
SRP051959_liver 0 .00 RPM
SRP051959_lung 0 .00 RPM
SRP051959_lymph_node 0 .00 RPM
SRP051959_skeletal_muscle 0 .00 RPM
SRP051959_spleen 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000004826 other_paralog 2 retrogenes
retro_cjac_1632, retro_cjac_2667,
Callithrix jacchus ENSCJAG00000010530 other_paralog 1 retrogene
retro_cjac_1144,
Callithrix jacchus ENSCJAG00000011697 within_species_paralog 1 retrogene
retro_cjac_3284,
Callithrix jacchus ENSCJAG00000017637 other_paralog 1 retrogene
retro_cjac_1649,
Dipodomys ordii ENSDORG00000015889 ortholog_many2many 1 retrogene
retro_dord_254,
Homo sapiens ENSG00000173213 ortholog_many2many 1 retrogene
retro_hsap_3733,
Homo sapiens ENSG00000173876 ortholog_many2many 1 retrogene
retro_hsap_3944,
Mus musculus ENSMUSG00000016255 possible_ortholog 1 retrogene
retro_mmus_1109,
Pongo abelii ENSPPYG00000011180 possible_ortholog 1 retrogene
retro_pabe_3250,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_800 83.55 70.74
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Download FASTA sequences of all ENSCJAG00000010101 retrocopies