Parental gene:

TUBB2A, ENSCJAG00000017637

Aliases:None
Description:tubulin, beta 2A class IIa [Source:HGNC Symbol;Acc:12412]
Organism:Marmoset (Callithrix jacchus)
Coordinates:4:25661566..25735266(+)


>ENSCJAG00000017637
GAGTCGAGGACATTTCATTGTGAGCCTTGGCGTTTCTGGGGATCGTGCAGTGCTAAATTTTGGGAGGTCATCAGTGATGA
ACATGGGATTGACCCCACTGGCAGTTACCATGGAGACAGTGATTTGCAGCTCGAGAGAATCAATGTTTACTACAATGAAG
CCACTGGTAACAAATACGTTCCCCGGGCCATCCTCGTGGATCTGGAGCCTGGCACGATGGATTCCGTTAGGTCTGGACCA
TTCGGTCAGATCTTCAGACCAGACAATTTCGTATTTGCCCTCTGGCAGGCCCAGAGCGGAGCCGGGAATAACTGGAAGGG
CCACTACACAGAGGGAGCTGAGCTGGTCGACTCGGTCCTGGACGTGGTGAGGAAGGAGTCAGAGAGTTGTGACTGTCTCC
AGGGCTTCCAGCTGACCCACTCTCTGGGGGGCGGCACGGGGTCCGGGATGGGCACCCTGCTCATCAGCAAGATCCGGGAG
GAGTACCCAGACCGCATCATGAACACCTTCAGCGTCATGCCCTCACCCAAGGTGTCAGACACGGTGGTGGAGCCCTACAA
TGCCACCCTCTCCGTCCACCAGCTGGTGGAAAACACAGATGAAACCTACTGCATTGACAACGAGGCCCTGTACGACATCT
GCTTCCGCACCCTGAAGCTGACCACCCCCACCTACGGGGACCTCAACCACCTGGTGTCAGCCACCATGAGCGGGGTCACC
ACCTGCCTGCGCTTCCCCGGCCAGCTGAACGCAGACCTGCGCAAGCTGGCGGTGAACATGGTGCCCTTCCCTCGCCTGCA
CTTCTTCATGCCGGGCTTTGCGCCCCTGACCAGCCGGGGTAGCCAGCAGTACCGCGCGCTCACGGTGCCCGAGCTCACCC
AGCAGATGTTCGACTCCAAGAACATGATGGCCGCCTGCGACCCGCGCCACGGCCGCTACCTGACGGTGGCTGCCATCTTC
CGGGGCCGCATGTCCATGAAGGAGGTGGACGAGCAGATGCTCAACGTGCAGAACAAGAACAGCAGCTACTTCGTGGAGTG
GATCCCCAACAACGTCAAGACGGCCGTGTGCGACATCCCGCCCCGCGGCCTGAAGATGTCGGCCACCTTCATTGGCAACA
GCACGGCCATCCAGGAGCTGTTCAAGCGCATCTCGGAGCAGTTCACGGCCATGTTCCGGCGCAAGGCCTTCCTGCACTGG
TACACGGGCGAGGGCATGGACGAGATGGAGTTCACCGAGGCCGAGAGCAACATGAACGACCTGGTGTCTGAGTACCAGCA
GTACCAGGATGCCACGGCTGACGAACAAGGGGAGTTCGAGGAGGAGGAGGGCGAGGACGAGGCGTAG

Library Parental gene expression (RPM)
SRP051959_spleen 3 .11 RPM
SRP051959_skeletal_muscle 3 .54 RPM
SRP051959_lymph_node 1 .60 RPM
SRP051959_lung 13 .08 RPM
SRP051959_liver 2 .66 RPM
SRP051959_kidney 6 .28 RPM
SRP051959_heart 9 .05 RPM
SRP051959_colon 13 .20 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000004826 within_species_paralog 2 retrogenes
retro_cjac_1632, retro_cjac_2667,
Callithrix jacchus ENSCJAG00000010101 other_paralog 1 retrogene
retro_cjac_800,
Callithrix jacchus ENSCJAG00000010530 within_species_paralog 1 retrogene
retro_cjac_1144,
Callithrix jacchus ENSCJAG00000011697 other_paralog 1 retrogene
retro_cjac_3284,
Myotis lucifugus ENSMLUG00000016179 possible_ortholog 1 retrogene
retro_mluc_401,
Tupaia belangeri ENSTBEG00000004854 ortholog_one2one 9 retrogenes
retro_tbel_2291, retro_tbel_3456, retro_tbel_3944, retro_tbel_4113, retro_tbel_413, retro_tbel_4390, retro_tbel_4439, retro_tbel_961, retro_tbel_962,
Tarsius syrichta ENSTSYG00000003440 ortholog_one2one 2 retrogenes
retro_tsyr_1068, retro_tsyr_2125,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1649 76.92 98.19
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Download FASTA sequences of all ENSCJAG00000017637 retrocopies