Parental gene:

MEA1, ENSCJAG00000004894

Aliases:None
Description:male-enhanced antigen 1 [Source:HGNC Symbol;Acc:6986]
Organism:Marmoset (Callithrix jacchus)
Coordinates:4:44330813..44332404(-)


>ENSCJAG00000004894
GCCCCTGCTCGGATGGCAACAGTAGTTCTAGGGGGAGACAGCATGGGCCCTGAGCGTATCTTCCCCAATCAGACTGAGGA
ACTGGGGCCACATCAGGGCCCTTCAGAAGGCACTGGGGATTGGAGCAGTGAGGAGCCTGAGGAAGAACAGGAGGAAACTG
GGTCTGGCCCAGCTAGCTATTCCTACCAGCCCCTGAACCAAGATCCTGAACAAGAGGAGGTGGAACTGGCACCAGTCGGG
GATGGAGATGTAGTTGCTGACATCCAGGATCGAATCCAGGCTCTGGGACTTCATTTGCCAGACCCACCATTAGAGAGTGA
TGATGAAGATGAAGAAGGAGCTACAGCGTTGAACAACCACAGCTCTATTCCCATGGACCCAGAACATGTAGAGCTGGTGA
AAAGGACGATGGCTGGAGTAAGCCTGCCTGCGCCAGGGGTTCCTGCCTGGGCTCGGGAGATATCAGATGCCCAGTGGGAA
GATGTGGTACAGAAAGCCCTCCAAGCCCGGCAGGCATCCCCTGCCTGGAAGTGA

Library Parental gene expression (RPM)
SRP051959_spleen 12 .63 RPM
SRP051959_skeletal_muscle 8 .04 RPM
SRP051959_lymph_node 11 .14 RPM
SRP051959_lung 12 .35 RPM
SRP051959_liver 13 .65 RPM
SRP051959_kidney 16 .17 RPM
SRP051959_heart 9 .00 RPM
SRP051959_colon 9 .61 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012655 ortholog_one2one 1 retrogene
retro_amel_1620,
Bos taurus ENSBTAG00000005536 ortholog_one2many 1 retrogene
retro_btau_240,
Canis familiaris ENSCAFG00000001756 ortholog_one2one 1 retrogene
retro_cfam_1643,
Cavia porcellus ENSCPOG00000022111 ortholog_one2one 1 retrogene
retro_cpor_1530,
Echinops telfairi ENSETEG00000002439 ortholog_one2many 1 retrogene
retro_etel_236,
Felis catus ENSFCAG00000031337 ortholog_one2many 1 retrogene
retro_fcat_1772,
Loxodonta africana ENSLAFG00000013881 ortholog_one2many 1 retrogene
retro_lafr_60,
Myotis lucifugus ENSMLUG00000012138 ortholog_one2one 2 retrogenes
retro_mluc_1819, retro_mluc_851,
Monodelphis domestica ENSMODG00000019002 ortholog_one2one 1 retrogene
retro_mdom_878,
Oryctolagus cuniculus ENSOCUG00000001565 ortholog_one2one 2 retrogenes
retro_ocun_1312, retro_ocun_1446,
Pelodiscus sinensis ENSPSIG00000002330 ortholog_one2one 1 retrogene
retro_psin_56,
Pteropus vampyrus ENSPVAG00000008711 ortholog_one2one 1 retrogene
retro_pvam_266,
Rattus norvegicus ENSRNOG00000017144 ortholog_one2one 2 retrogenes
retro_rnor_716, retro_rnor_961,
Tupaia belangeri ENSTBEG00000012294 ortholog_one2one 2 retrogenes
retro_tbel_1462, retro_tbel_3528,
Tursiops truncatus ENSTTRG00000006996 ortholog_one2one 1 retrogene
retro_ttru_357,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_824 90.12 96.61
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2. retro_cjac_2054 88.76 100.00
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Download FASTA sequences of all ENSCJAG00000004894 retrocopies