Parental gene:

MEA1, ENSCPOG00000022111

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_15:31462175..31463179(+)


>ENSCPOG00000022111
TTTGGTCCCTATTCCTCCGTTCTTGCAGCCCCAGCCCGCATGGCAGCAGCAGTTCTAACGGGAGACACCATGGGCCCTGA
GCGTATCTTCCCAAACCAAAGCGAGGACCTGGGGCCACACCAGGGCCCCACAGAAGGCACCGGGGATTGGAGCAGTGAAG
AACCTGAGGAGGAGCAGGAGGACACAGGGGTAGGCCCAGCTGGCTACTCCTATCAACCACTGAACCAAGACCCTGACCCC
GAAGAGGTAGAGCTGGCACCCGTGGGGGATGGAGATGTAGTTGCTGACATCCAGGATCGGATCCAGGCCCTGGGACTTCA
TTTGCCTGACCCACCATTAGAGAGTGAGGATGAAGATGAGGAGGGAGCCGCAGCACTGAGCAACCACAGTTCCATCCCCA
TGGACCCAGAGCACGTAGAACTGGTGAAAAGGACAATGGCTGGAGTAAGTCTACCTGCACCAGGGGTTCCTGCCTGGGCT
CGGGAGATATCAGATGCCCAGTGGGAAGATGTGGTACAGAAAGCTCTCCAAGCCCGGCAGGCATCTCCAGCCTGGAAG

Library Parental gene expression (RPM)
SRP017611_brain 38 .36 RPM
SRP017611_kidney 29 .31 RPM
SRP017611_liver 23 .33 RPM
SRP040447_lung 27 .84 RPM
SRP040447_skeletal_muscle 9 .33 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012655 ortholog_one2one 1 retrogene
retro_amel_1620,
Bos taurus ENSBTAG00000005536 ortholog_one2many 1 retrogene
retro_btau_240,
Canis familiaris ENSCAFG00000001756 ortholog_one2one 1 retrogene
retro_cfam_1643,
Callithrix jacchus ENSCJAG00000004894 ortholog_one2one 2 retrogenes
retro_cjac_2054, retro_cjac_824,
Echinops telfairi ENSETEG00000002439 ortholog_one2many 1 retrogene
retro_etel_236,
Felis catus ENSFCAG00000031337 ortholog_one2many 1 retrogene
retro_fcat_1772,
Loxodonta africana ENSLAFG00000013881 ortholog_one2many 1 retrogene
retro_lafr_60,
Myotis lucifugus ENSMLUG00000012138 ortholog_one2one 2 retrogenes
retro_mluc_1819, retro_mluc_851,
Monodelphis domestica ENSMODG00000019002 ortholog_one2one 1 retrogene
retro_mdom_878,
Oryctolagus cuniculus ENSOCUG00000001565 ortholog_one2one 2 retrogenes
retro_ocun_1312, retro_ocun_1446,
Pelodiscus sinensis ENSPSIG00000002330 ortholog_one2one 1 retrogene
retro_psin_56,
Pteropus vampyrus ENSPVAG00000008711 ortholog_one2one 1 retrogene
retro_pvam_266,
Rattus norvegicus ENSRNOG00000017144 ortholog_one2one 2 retrogenes
retro_rnor_716, retro_rnor_961,
Tupaia belangeri ENSTBEG00000012294 ortholog_one2one 2 retrogenes
retro_tbel_1462, retro_tbel_3528,
Tursiops truncatus ENSTTRG00000006996 ortholog_one2one 1 retrogene
retro_ttru_357,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1530 92.62 65.59
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Download FASTA sequences of all ENSCPOG00000022111 retrocopies