Parental gene:

WDR12, ENSCJAG00000005171

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:6:118451470..118481696(-)


>ENSCJAG00000005171
ATGGCTCAACTGCAAACACGCTTCTACACTGATAACAAGAAATATGCCGTAGATGATGTTCCCTTCTCAATCCCTGCCAC
CTCTGAAATTGCTGACCTTAGTAACATCATCAATAAATTACTAAAGGACAAAAATGAGTTCCACAAACATGTGGAGTTTG
ATTTCCTTATTAAGGGCCAGTTTCTGCGAATGCCCTTGGTCAAACACATGGAACTGGAGAACATCTCATCAGAAGAAGTT
GTGGAAATAGAATACGTGGAGAAATATACTGCACCCCAGCCAGAGCAATGCATGTTCCATGATGACTGGATTAGTTCAGT
TAAAGGGGCAGAGGAATGGATCTTGACTGGTTCTTATGATAAGACTTCTCGGATCTGGTCCTTGGAAGGAAAGTTGATAA
TGACAACTGTGGGACATACGGATGTTGTAAAAGATGTGGCCTGGGTAAAAAAAGATAGTTTGTCCTGCTTATTATTGAGT
GCCTCTATGGATCAGACTATTCTCTTATGGGAGTGGAATGTAGAGAGAAACAAAGTGAAAGCCCTACATTGCTGCAGAGG
GCATGCTGGAAGTGTAGATTCTATAGCTGTTGATGGCTCGGGAACTAAATTTTGCAGTGGCTCCTGGGATAAGATGCTAA
AGATCTGGTCTACAGTCCCTACAGATGAAGAAGATGAAATGGAGGAGTCCACAAATCGACCAAGAAAGAAACAGAAAACA
GAGCAGTTGGGACTAACAAGAACTCCCATAGTGACCCTCTCTGGCCACAAGGAAGCAGTTTCCTCAGTTCTGTGGTCAGA
TGCTGAAGAAATCTGCAGTGCATCTTGGGACCATACAATTAGAGTGTGGGATGTTGAGTCTGGCAGTCTTAAGTCAACTT
TGACAGGAAATAAAGTGTTTAATTGTATTTCCTATTCTCCAATTTGTAAACGTTTAGCATCTGGAAGCACAGATAGGCAT
ATCAGACTGTGGGATCCCCGAACTAAAGATGGTTCTTTGGTGTCGCTGTCCCTAACTTCACATACTGGTTGGGTGACATC
AGTAAAATGGTCTCCTACCCATGAACAGCAACTGATTTCAGGATCTTTAGATAACATTGTTAAGCTGTGGGATACAAGAA
GTTGTAAGGCTCCTCTCTATGATCTGGCTGCTCATGAAGACAAAGTTCTGAGTGTAGACTGGACAGACACAGGGCTACTT
CTGAGTGGAGGAGCAGACAATAAATTGTATTCCTACAGATATTCACCTACGACTTCCCATGTGGGGGCATGA

Library Parental gene expression (RPM)
SRP051959_colon 11 .34 RPM
SRP051959_heart 9 .47 RPM
SRP051959_kidney 13 .47 RPM
SRP051959_liver 7 .30 RPM
SRP051959_lung 11 .66 RPM
SRP051959_lymph_node 8 .97 RPM
SRP051959_skeletal_muscle 12 .29 RPM
SRP051959_spleen 9 .29 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000012519 ortholog_one2one 1 retrogene
retro_cfam_1759,
Choloepus hoffmanni ENSCHOG00000013851 ortholog_one2one 1 retrogene
retro_chof_118,
Cavia porcellus ENSCPOG00000008824 ortholog_one2one 1 retrogene
retro_cpor_1107,
Homo sapiens ENSG00000138442 ortholog_one2one 1 retrogene
retro_hsap_1615,
Gorilla gorilla ENSGGOG00000026073 ortholog_one2one 1 retrogene
retro_ggor_1222,
Loxodonta africana ENSLAFG00000011955 ortholog_one2one 1 retrogene
retro_lafr_1102,
Mus musculus ENSMUSG00000026019 ortholog_one2one 3 retrogenes
retro_mmus_1394, retro_mmus_2649, retro_mmus_2897,
Nomascus leucogenys ENSNLEG00000007018 ortholog_one2one 1 retrogene
retro_nleu_2743,
Pongo abelii ENSPPYG00000013089 ortholog_one2one 1 retrogene
retro_pabe_1327,
Pan troglodytes ENSPTRG00000012823 ortholog_one2one 1 retrogene
retro_ptro_1083,
Tursiops truncatus ENSTTRG00000001231 ortholog_one2one 1 retrogene
retro_ttru_1380,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2690 77.14 57.45
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Download FASTA sequences of all ENSCJAG00000005171 retrocopies