Parental gene: | ENSCJAG00000005695 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 1:71829492..71981758(-) |
>ENSCJAG00000005695
ATGGCGGCCGCGGTGGCGATGGCACCTGGGACATTGGGATCCCTTCATGCTGGCGGCGTCCGCCTAGTAGCTGCTTGCAA
TGCGTGGCTCTGCCAGGGGTTGAGGCTTCCCGGCTCGTTGGCAGGCCGGCGGGTGGGCCCGGCGATCTGGGCCCAGAGCT
GGGTGCCTGTGGCCGGGGGTCCCGCACCAAGAAGGGGCTACAGCTCTGAGGTGAAGACGGAGGACGAACTACGGGTGCGG
CACCTGGAGGACGAGAACCGAGGAATTGTGGTGCTTGGAATAAACAGAGCTTATGGCAAAAATTCACTCAGTAAAAATCT
TATAAAAATGCTATCAAAAGCTGTGGATGCTTTGAAATCTGATAAGAAAGTACGGACCATAATAATCAGGAGTGAAGTCC
CAGGGATATTCTGTGCTGGTGCTGACCTTAAGGAAAGAGCCAAAATGAGTTCCAGTGAAGTTGGTCCTTTTGTCTCCAAA
ATAAGAGCAGTGATTAATGATATTGCTAATCTTCCAGTGCCAACGATTGCAGCAATAGATGGACTTGCTTTAGGTGGTGG
TCTTGAACTGGCTTTAGCTTGTGATATACGAGTAGCAGCTTCCTCTGCAAAAATGGGCCTGGTTGAAACAAAATTGGCAA
TTATTCCTGGTGGAGGGGGGACACAGCGATTGCCACGTGCCATTGGAATGTCCCTGGCCAAGGAGCTCATATTCTCTGCG
CGAGTCCTTGATGGCCAGGAAGCCAAAGCAGTGGGCTTAATCAGCCATGTTCTGGAACAGAACCAGGAGGGAGATGCTGC
CTACAGAAAGGCCCTGGACCTGGCAAGAGAGTTTTTACCTCAGGGACCTGTTGCAGTGAGAGTGGCAAAATTAGCAATTA
ATCAAGGCATGGAGGTCGATTTAGTAACAGGGTTAGCCATAGAAGAAGCTTGTTATGCTCAGACCATTCCAACGAAAGAC
AGACTTGAAGGTCTTCTTGCTTTTAAAGAGAAAAGGCCCCCTCGCTATAAAGGAGAATAA
ATGGCGGCCGCGGTGGCGATGGCACCTGGGACATTGGGATCCCTTCATGCTGGCGGCGTCCGCCTAGTAGCTGCTTGCAA
TGCGTGGCTCTGCCAGGGGTTGAGGCTTCCCGGCTCGTTGGCAGGCCGGCGGGTGGGCCCGGCGATCTGGGCCCAGAGCT
GGGTGCCTGTGGCCGGGGGTCCCGCACCAAGAAGGGGCTACAGCTCTGAGGTGAAGACGGAGGACGAACTACGGGTGCGG
CACCTGGAGGACGAGAACCGAGGAATTGTGGTGCTTGGAATAAACAGAGCTTATGGCAAAAATTCACTCAGTAAAAATCT
TATAAAAATGCTATCAAAAGCTGTGGATGCTTTGAAATCTGATAAGAAAGTACGGACCATAATAATCAGGAGTGAAGTCC
CAGGGATATTCTGTGCTGGTGCTGACCTTAAGGAAAGAGCCAAAATGAGTTCCAGTGAAGTTGGTCCTTTTGTCTCCAAA
ATAAGAGCAGTGATTAATGATATTGCTAATCTTCCAGTGCCAACGATTGCAGCAATAGATGGACTTGCTTTAGGTGGTGG
TCTTGAACTGGCTTTAGCTTGTGATATACGAGTAGCAGCTTCCTCTGCAAAAATGGGCCTGGTTGAAACAAAATTGGCAA
TTATTCCTGGTGGAGGGGGGACACAGCGATTGCCACGTGCCATTGGAATGTCCCTGGCCAAGGAGCTCATATTCTCTGCG
CGAGTCCTTGATGGCCAGGAAGCCAAAGCAGTGGGCTTAATCAGCCATGTTCTGGAACAGAACCAGGAGGGAGATGCTGC
CTACAGAAAGGCCCTGGACCTGGCAAGAGAGTTTTTACCTCAGGGACCTGTTGCAGTGAGAGTGGCAAAATTAGCAATTA
ATCAAGGCATGGAGGTCGATTTAGTAACAGGGTTAGCCATAGAAGAAGCTTGTTATGCTCAGACCATTCCAACGAAAGAC
AGACTTGAAGGTCTTCTTGCTTTTAAAGAGAAAAGGCCCCCTCGCTATAAAGGAGAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 7 .48 RPM |
| SRP051959_skeletal_muscle | 13 .95 RPM |
| SRP051959_lymph_node | 9 .31 RPM |
| SRP051959_lung | 8 .10 RPM |
| SRP051959_liver | 18 .32 RPM |
| SRP051959_kidney | 17 .37 RPM |
| SRP051959_heart | 10 .77 RPM |
| SRP051959_colon | 6 .03 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000021374 | other_paralog | 5 retrogenes | |
| Cavia porcellus | ENSCPOG00000001066 | ortholog_one2many | 1 retrogene | |
| Oreochromis niloticus | ENSONIG00000011227 | ortholog_many2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000021099 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_93 | 97.64 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000005695 retrocopies