Common name: Tilapia
Latin name: Oreochromis niloticus
Genome assembly: Orenil1.0
All retrocopies: 63
Parental genes: 49

Summary: Number of retrocopies :
Conserved ORF: 55 ORF 8 ORF
Expressed retrocopies (EST): 1 EST 62 EST

# RetrogeneDB ID Identity Coverage ORF conservation Expression evidence
1. retro_onil_1 80.84 % 64.76 % ORF EST
2. retro_onil_2 86.10 % 96.16 % ORF EST
3. retro_onil_3 67.50 % 97.19 % ORF EST
4. retro_onil_4 73.97 % 82.95 % ORF EST
5. retro_onil_5 64.74 % 59.86 % ORF EST
6. retro_onil_6 68.54 % 63.18 % ORF EST
7. retro_onil_7 61.05 % 83.20 % ORF EST
8. retro_onil_8 50.35 % 87.12 % ORF EST
9. retro_onil_9 59.84 % 92.08 % ORF EST
10. retro_onil_10 60.80 % 66.79 % ORF EST
11. retro_onil_11 72.05 % 96.95 % ORF EST
12. retro_onil_12 100.00 % 100.00 % ORF EST
13. retro_onil_13 73.78 % 97.73 % ORF EST
14. retro_onil_14 73.63 % 96.78 % ORF EST
15. retro_onil_15 70.52 % 98.19 % ORF EST
16. retro_onil_16 73.88 % 100.00 % ORF EST
17. retro_onil_17 58.60 % 70.27 % ORF EST
18. retro_onil_18 98.31 % 100.00 % ORF EST
19. retro_onil_19 56.64 % 73.86 % ORF EST
20. retro_onil_20 71.68 % 99.84 % ORF EST
21. retro_onil_21 61.32 % 59.22 % ORF EST
22. retro_onil_22 68.60 % 50.63 % ORF EST
23. retro_onil_23 78.10 % 74.86 % ORF EST
24. retro_onil_24 64.59 % 75.31 % ORF EST
25. retro_onil_25 78.01 % 100.00 % ORF EST
26. retro_onil_26 75.55 % 100.00 % ORF EST
27. retro_onil_27 91.81 % 61.51 % ORF EST
28. retro_onil_28 65.93 % 99.12 % ORF EST
29. retro_onil_29 81.67 % 61.51 % ORF EST
30. retro_onil_30 83.39 % 99.79 % ORF EST
31. retro_onil_31 53.22 % 81.23 % ORF EST
32. retro_onil_32 83.61 % 94.82 % ORF EST
33. retro_onil_33 79.08 % 99.30 % ORF EST
34. retro_onil_34 52.94 % 61.98 % ORF EST
35. retro_onil_35 60.71 % 69.72 % ORF EST
36. retro_onil_36 52.73 % 56.12 % ORF EST
37. retro_onil_38 56.45 % 54.23 % ORF EST
38. retro_onil_39 73.62 % 63.19 % ORF EST
39. retro_onil_40 80.99 % 57.08 % ORF EST
40. retro_onil_41 97.06 % 100.00 % ORF EST
41. retro_onil_42 97.40 % 63.11 % ORF EST
42. retro_onil_43 57.41 % 56.91 % ORF EST
43. retro_onil_44 97.08 % 63.11 % ORF EST
44. retro_onil_45 97.06 % 100.00 % ORF EST
45. retro_onil_46 97.06 % 100.00 % ORF EST
46. retro_onil_47 97.06 % 100.00 % ORF EST
47. retro_onil_48 98.47 % 65.50 % ORF EST
48. retro_onil_50 100.00 % 63.13 % ORF EST
49. retro_onil_51 97.06 % 100.00 % ORF EST
50. retro_onil_52 77.92 % 52.05 % ORF EST
51. retro_onil_54 97.06 % 100.00 % ORF EST
52. retro_onil_56 97.06 % 100.00 % ORF EST
53. retro_onil_57 82.85 % 90.30 % ORF EST
54. retro_onil_59 86.24 % 75.70 % ORF EST
55. retro_onil_60 97.06 % 100.00 % ORF EST
56. retro_onil_61 97.06 % 100.00 % ORF EST
57. retro_onil_62 99.59 % 100.00 % ORF EST
58. retro_onil_63 97.06 % 100.00 % ORF EST
59. retro_onil_65 97.06 % 100.00 % ORF EST
60. retro_onil_66 61.25 % 91.89 % ORF EST
61. retro_onil_67 72.09 % 53.64 % ORF EST
62. retro_onil_68 95.86 % 95.73 % ORF EST
63. retro_onil_69 97.06 % 100.00 % ORF EST
# Ensembl ID Symbol Description
1. ENSONIG00000015805 h3f3a H3 histone, family 3A [Source:ZFIN;Acc:ZDB-GENE-040426-1928]
2. ENSONIG00000019975 H3F3B H3 histone, family 3B (H3.3B) [Source:HGNC Symbol;Acc:4765]
3. ENSONIG00000013199
4. ENSONIG00000011933 gja3 gap junction protein, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-031217-3]
5. ENSONIG00000005340 KCNS1
6. ENSONIG00000011405 KATNA1
7. ENSONIG00000014203 gpr22 G protein-coupled receptor 22 [Source:ZFIN;Acc:ZDB-GENE-041210-48]
8. ENSONIG00000012248 zgc:66127 zgc:66127 [Source:ZFIN;Acc:ZDB-GENE-040426-1546]
9. ENSONIG00000006539 RPL18 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:P69091]
10. ENSONIG00000015291 SLC5A3 (2 of 2) solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 [Source:HGNC Symbol;Acc:11038]
11. ENSONIG00000007414 RHOG
12. ENSONIG00000005553 pdcd10a programmed cell death 10a [Source:ZFIN;Acc:ZDB-GENE-040426-1432]
13. ENSONIG00000006658 mcl1b (2 of 2) myeloid cell leukemia sequence 1b [Source:ZFIN;Acc:ZDB-GENE-030825-1]
14. ENSONIG00000017219 RHO (1 of 2) rhodopsin [Source:HGNC Symbol;Acc:10012]
15. ENSONIG00000000160 elfn1b extracellular leucine-rich repeat and fibronectin type III domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080327-21]
16. ENSONIG00000017693 SSTR5 (2 of 2) somatostatin receptor 5 [Source:HGNC Symbol;Acc:11334]
17. ENSONIG00000006909 MC5R
18. ENSONIG00000002446 FAM92A1
19. ENSONIG00000013021 stom (2 of 2) stomatin [Source:ZFIN;Acc:ZDB-GENE-980526-486]
20. ENSONIG00000011227 auh (1 of 2) AU RNA binding protein/enoyl-Coenzyme A hydratase [Source:ZFIN;Acc:ZDB-GENE-040801-95]
21. ENSONIG00000003785 arpc3 (2 of 2) actin related protein 2/3 complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040625-107]
22. ENSONIG00000004042 KLHL25
23. ENSONIG00000013358 Gap junction protein [Source:UniProtKB/TrEMBL;Acc:I3K6P7]
24. ENSONIG00000010199 LINGO3 (1 of 2) leucine rich repeat and Ig domain containing 3 [Source:HGNC Symbol;Acc:21206]
25. ENSONIG00000004759 hspa8 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
26. ENSONIG00000009584 SCO1
27. ENSONIG00000017151 RAC3 ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) [Source:HGNC Symbol;Acc:9803]
28. ENSONIG00000014098 npy2rl neuropeptide Y receptor Y2, like [Source:ZFIN;Acc:ZDB-GENE-111115-4]
29. ENSONIG00000012310 tnnt2a troponin T2a, cardiac [Source:ZFIN;Acc:ZDB-GENE-000626-1]
30. ENSONIG00000013523 RNF5
31. ENSONIG00000018884 rhoab (1 of 2) ras homolog gene family, member Ab [Source:ZFIN;Acc:ZDB-GENE-040322-2]
32. ENSONIG00000015041 FEM1C
33. ENSONIG00000015868 OPN4 (1 of 3) opsin 4 [Source:HGNC Symbol;Acc:14449]
34. ENSONIG00000008086 smyhc3 slow myosin heavy chain 3 [Source:ZFIN;Acc:ZDB-GENE-080930-1]
35. ENSONIG00000004218
36. ENSONIG00000019497 brms1la breast cancer metastasis-suppressor 1-like a [Source:ZFIN;Acc:ZDB-GENE-050913-49]
37. ENSONIG00000010229 rxfp3.2a relaxin/insulin-like family peptide receptor 3.2a [Source:ZFIN;Acc:ZDB-GENE-121026-2]
38. ENSONIG00000018317 cx34.5 connexin 34.5 [Source:ZFIN;Acc:ZDB-GENE-050224-2]
39. ENSONIG00000017737 SFPQ
40. ENSONIG00000004482
41. ENSONIG00000000370 LSM3 (2 of 2) LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Source:HGNC Symbol;Acc:17874]
42. ENSONIG00000009117 cdk5r2a cyclin-dependent kinase 5, regulatory subunit 2a (p39) [Source:ZFIN;Acc:ZDB-GENE-050417-22]
43. ENSONIG00000014134 gtf3ab general transcription factor IIIA, b [Source:ZFIN;Acc:ZDB-GENE-030131-7698]
44. ENSONIG00000003353 PAQR8 (2 of 2) progestin and adipoQ receptor family member VIII [Source:HGNC Symbol;Acc:15708]
45. ENSONIG00000017630 eef1b2 (2 of 2) eukaryotic translation elongation factor 1 beta 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7310]
46. ENSONIG00000009973
47. ENSONIG00000009892 lrrc30 leucine rich repeat containing 30 [Source:ZFIN;Acc:ZDB-GENE-050506-25]
48. ENSONIG00000018945
49. ENSONIG00000000006 RPS16
Retrogenes FASTA BED
TSV (download all or selected columns from MySQL table)
Parental genes FASTA BED
TSV (download all or selected columns from MySQL table)