Parental gene:

RAB25, ENSCJAG00000007715

Aliases:None
Description:RAB25, member RAS oncogene family [Source:HGNC Symbol;Acc:18238]
Organism:Marmoset (Callithrix jacchus)
Coordinates:18:10072768..10083505(+)


>ENSCJAG00000007715
ATGGGGAATGGAACGGAGGAAGATTATAACTTTGTCTTCAAGGTGGTGCTGATCGGCGAATCAGGTGTGGGGAAGACCAA
TCTGCTCTCCCGATTCACGCGCAATGAGTTCAGCCACGACAGCCGCACTACCATCGGGGTTGAGTTCTCCACCCGCACTG
TGATGCTGGGCACAGCTGCTGTCAAGGCTCAGATCTGGGACACAGCTGGCCTGGAGCGGTACCGAGCCATCACCTCAGCG
TACTATCGTGGTGCAGTGGGGGCCCTCCTGGTGTTTGACCTAACCAAGCACCAGACCTATGCTGTGGTGGAGCGCTGGTT
GAAGGAGCTCTATGACCATGCTGAAGCCACGATCGTTGTCATGCTCGTGGGTAACAAGAGTGACCTCAGCCAGGCCCGGG
AAGTGCCCACTGAGGAGGCCCGCATGTTCGCTGAAAACAATGGACTGCTCTTCCTAGAGACCTCAGCCCTGGACTCCACC
AATGTTGAGCTAGCCTTTGAGACTGTCCTGAAAGAGATCTTTGAGAAGGTATCCAAGCAGAGACAGAACAGCACCCGGAC
CAATGCCATCACTCTGGGCGGTGCTAGGGTGGGCAGGAGCCTGGCTTGGGGAGAAGAGGGCCTGTTGCATCAGCCTCTGA
CCTTGGCCAGCACCACCTGCCCCCACTGGCTTCTGGTACCCCTTGTCCCCACCTCAACCCCAGGACCTTTCCCTGCCCTT
TGGTTCCGGATGTTAGACTGTTCCCTGTTCACAGCACCCCCAGGGCCTTAA

Library Parental gene expression (RPM)
SRP051959_spleen 0 .11 RPM
SRP051959_skeletal_muscle 0 .02 RPM
SRP051959_lymph_node 0 .18 RPM
SRP051959_lung 1 .69 RPM
SRP051959_liver 0 .06 RPM
SRP051959_kidney 1 .82 RPM
SRP051959_heart 0 .02 RPM
SRP051959_colon 10 .98 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000007333 within_species_paralog 1 retrogene
retro_cjac_1050,
Callithrix jacchus ENSCJAG00000010778 within_species_paralog 2 retrogenes
retro_cjac_3866, retro_cjac_3917,
Macropus eugenii ENSMEUG00000016598 ortholog_one2one 2 retrogenes
retro_meug_1684, retro_meug_770,
Monodelphis domestica ENSMODG00000016955 ortholog_one2one 1 retrogene
retro_mdom_1710,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1256 89.31 60.94
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Download FASTA sequences of all ENSCJAG00000007715 retrocopies