Parental gene:

CDCA7, ENSCJAG00000007809

Aliases:None
Description:cell division cycle associated 7 [Source:HGNC Symbol;Acc:14628]
Organism:Marmoset (Callithrix jacchus)
Coordinates:6:45111784..45125817(-)


>ENSCJAG00000007809
ATGGACGCTAGCCGCGTGCCGCAGAAAGATCTCAGAGTAAAGAACTTAAAGAAATTCAGATATGTGAAGTTGATTTCCAT
GGAAACCTCATCATCCTCTGATGACAGTTGTGACAGCTTTGCTTCTGATAATTTTGCAAACACGAAACCTAAATTCAGGT
CAGATATCAGTGAAGAACTGGCAAATGTTTTTTATGAGGACTCTGATAATGAATCTTTCTGCGGCTTTTCAGAAAGTGAG
GTGCAAGATGTATTAGACCATTGTGGATTTTTACAGAAACCAAGGCCAGATGTCACTAACGAACTGGCCAGTATTTTTCA
TGCCGACTCTGACGATGAATCATTTTGCGGTTTCTCAGAGAGTGAGATACAAGATGGAATGAGGCTACAGTCAGTTCGGG
AAGGCTGTAGGACCCGCAGCCAGTGCAGGCACTCTGGACCTCTCAGGGTGGCGATGAAGTTTCCAGCTCGAAGTACCAGA
GGAGCAACCAACAAAAAAGCAGAGCTCCCACAGTCCTCCGAGAATTCTGTGACTGATTCCGACTCCGATTCAGAAGATGA
AAGTGGGATGAATTTTTTGGAGAAAAGGGCTTTAAATATAAAGCAAAATAAAGCAATGCTTGCAAAACTCATGTCTGAAT
TAGAAAGCTTCCCTGGCTCATTCCCTGGAAGACATTCCCTCCCAGGCTCCAACTCACAATCGAGGAGACCTCGAAGGCGT
ACATTCCCAGGTGTTGCGTCCAGGAGAAACCCTGAACGGAGAGCTCGTCCTCTTACCAGGTCAAGGTCCCGGATCCTTGG
GTCTGTTGACACCCTACCCATGGAGGAGGAGGAGGAGGAAGAGGATAAGTACATGTTGGTGAGAAAGAGGAAGACCATGG
ACAGCTATGTGAATGAAGATGACATGCCCAGAAGTCGTCGCTGCAGGTCATCCCTGACCCTTCCACATATAATTCGCCCA
GTGGAAGAAATCACAGAGGAAGATTTGGAGAACATCTGCAGCAGCTCTCGAGAGAAGATATATAACCGTTCACTGGGCTC
TACTTGTCATCAATGCCGTCAGAAGACTATTGATACCAAAACAAACTGCAGAAACCCAGACTGCTGCGGTGTTCGAGGAC
AATTCTGTGGCCCCTGCCTTCGAAACCGTTATGGTGAAGAGGTCAGGGATGCTCTGCTGGATCCGAACTGGCATTGCCCG
CCTTGTCGAGGAATCTGCAACTGCAGTTTCTGCCGGCAGCGAGATGGACGGTGTGCAACTGGGGTTCTTGTGTATTTAGC
CAAATATCATGGCTTTGGGAATGTGCATGCCTACTTGAAAAGTCTGAAACAGGAATTTGAAATGCAAGCATAA

Library Parental gene expression (RPM)
SRP051959_spleen 5 .36 RPM
SRP051959_skeletal_muscle 0 .48 RPM
SRP051959_lymph_node 9 .04 RPM
SRP051959_lung 8 .31 RPM
SRP051959_liver 1 .28 RPM
SRP051959_kidney 4 .39 RPM
SRP051959_heart 2 .46 RPM
SRP051959_colon 11 .18 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000011784 ortholog_many2many 2 retrogenes
retro_cpor_661, retro_cpor_691,
Homo sapiens ENSG00000144354 ortholog_one2one 1 retrogene
retro_hsap_3438,
Mus musculus ENSMUSG00000055612 ortholog_one2many 2 retrogenes
retro_mmus_1493, retro_mmus_1494,
Nomascus leucogenys ENSNLEG00000005787 ortholog_one2one 1 retrogene
retro_nleu_2295,
Pan troglodytes ENSPTRG00000012645 ortholog_one2one 1 retrogene
retro_ptro_2331,
Ictidomys tridecemlineatus ENSSTOG00000009026 ortholog_one2many 1 retrogene
retro_itri_369,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_4087 77.82 62.22
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Download FASTA sequences of all ENSCJAG00000007809 retrocopies