Parental gene:

UBE2H, ENSCJAG00000010520

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:8:116379083..116424369(+)


>ENSCJAG00000010520
TGGAGCGCACCAAACCCTGAGGCAAGTCTGAAGAAGGTGGAGTTTGCGGGTAAACTCATTGAGAGTAAACATGAGGTTAC
GATCCTGGGAGGACTCAATGAATTTGTAGTGAAGTTTTATGGACCACAAGGAACACCATATGAAGGCGGAGTATGGAAAG
TTAGAGTGGACCTACCTGATAAATACCCTTTCAAATCTCCATCTATAGGATTCATGAATAAAATTTTCCATCCCAACATT
GATGAAGCGTCAGGAACTGTGTGTCTAGATGTAATTAATCAAACTTGGACAGCTCTCTATGGAAATGATCTAAGTGATTG
TTTTAAGAATGATGGACTTCCCAGGGTCATAGTGTACAAAGGTGAAATAGACCCAGATGAAATCACCCCAAATATCATCT
GTGTATACCTGGCAAGAAGAGAGTTAACTTTTGTTGAGATAAAGCAGTACATCCAGAAATACGCCACGGAGGAGGCGCTG
AAAGAGCAGGAAGAGGGCACCGGGGACAGCTCATCGGAAAGCTCTATGTCTGACTTTTCCGAAGATGAGGCCCAGGATAT
GGAGTTGTAG

Library Parental gene expression (RPM)
SRP051959_spleen 8 .42 RPM
SRP051959_skeletal_muscle 4 .39 RPM
SRP051959_lymph_node 7 .44 RPM
SRP051959_lung 6 .75 RPM
SRP051959_liver 4 .01 RPM
SRP051959_kidney 7 .70 RPM
SRP051959_heart 5 .82 RPM
SRP051959_colon 7 .08 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000003605 ortholog_one2one 2 retrogenes
retro_chof_1862, retro_chof_1932,
Homo sapiens ENSG00000186591 ortholog_one2one 1 retrogene
retro_hsap_3977,
Nomascus leucogenys ENSNLEG00000012685 ortholog_one2one 1 retrogene
retro_nleu_2037,
Pongo abelii ENSPPYG00000017997 ortholog_one2one 1 retrogene
retro_pabe_3271,
Rattus norvegicus ENSRNOG00000048205 ortholog_one2one 2 retrogenes
retro_rnor_2188, retro_rnor_2266,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1081 78.49 91.01
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Download FASTA sequences of all ENSCJAG00000010520 retrocopies